Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6I35_RS05375 Genome accession   NZ_CP068215
Coordinates   1128456..1129082 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain FDAARGOS_1078     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1123456..1134082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I35_RS05355 (I6I35_05355) - 1123855..1125615 (-) 1761 WP_032653157.1 Lon protease family protein -
  I6I35_RS05360 (I6I35_05360) matP 1125802..1126254 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  I6I35_RS05365 (I6I35_05365) ompA 1126320..1127372 (-) 1053 WP_017694761.1 porin OmpA -
  I6I35_RS05370 (I6I35_05370) sulA 1127729..1128238 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  I6I35_RS05375 (I6I35_05375) sxy/tfoX 1128456..1129082 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  I6I35_RS05380 (I6I35_05380) yccS 1129039..1131201 (-) 2163 WP_032653159.1 YccS family putative transporter -
  I6I35_RS05385 (I6I35_05385) - 1131220..1131666 (-) 447 WP_003858149.1 YccF domain-containing protein -
  I6I35_RS05390 (I6I35_05390) helD 1131789..1133843 (+) 2055 WP_032653161.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=528105 I6I35_RS05375 WP_017384804.1 1128456..1129082(+) (sxy/tfoX) [Enterobacter hormaechei strain FDAARGOS_1078]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=528105 I6I35_RS05375 WP_017384804.1 1128456..1129082(+) (sxy/tfoX) [Enterobacter hormaechei strain FDAARGOS_1078]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCTCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572