Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | I6I42_RS00665 | Genome accession | NZ_CP068145 |
| Coordinates | 151384..151905 (-) | Length | 173 a.a. |
| NCBI ID | WP_004238253.1 | Uniprot ID | J7TBA8 |
| Organism | Morganella morganii strain FDAARGOS_1085 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 151384..209527 | 151384..151905 | within | 0 |
Gene organization within MGE regions
Location: 151384..209527
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I42_RS00665 (I6I42_00665) | ssb | 151384..151905 (-) | 522 | WP_004238253.1 | single-stranded DNA-binding protein | Machinery gene |
| I6I42_RS00670 (I6I42_00670) | uvrA | 152184..155018 (+) | 2835 | WP_201893458.1 | excinuclease ABC subunit UvrA | - |
| I6I42_RS00675 (I6I42_00675) | - | 155408..155674 (+) | 267 | WP_004241544.1 | DksA/TraR family C4-type zinc finger protein | - |
| I6I42_RS00680 (I6I42_00680) | - | 155726..156922 (-) | 1197 | WP_024475191.1 | amino acid aminotransferase | - |
| I6I42_RS00685 (I6I42_00685) | alr | 156978..158057 (-) | 1080 | WP_024475192.1 | alanine racemase | - |
| I6I42_RS00690 (I6I42_00690) | dnaB | 158137..159543 (-) | 1407 | WP_015422419.1 | replicative DNA helicase | - |
| I6I42_RS00695 (I6I42_00695) | - | 159776..160759 (+) | 984 | WP_004238260.1 | quinone oxidoreductase | - |
| I6I42_RS00700 (I6I42_00700) | dusA | 160824..161870 (-) | 1047 | WP_201893460.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| I6I42_RS00705 (I6I42_00705) | - | 161969..163051 (+) | 1083 | WP_201893462.1 | site-specific integrase | - |
| I6I42_RS18740 | - | 163373..163849 (-) | 477 | WP_236595586.1 | hypothetical protein | - |
| I6I42_RS00715 (I6I42_00715) | umuC | 164213..165475 (-) | 1263 | WP_201893464.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| I6I42_RS00720 (I6I42_00720) | umuD | 165475..165891 (-) | 417 | WP_201893467.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| I6I42_RS00725 (I6I42_00725) | - | 165941..166225 (+) | 285 | WP_201893469.1 | DinI-like family protein | - |
| I6I42_RS18745 | - | 166265..167878 (-) | 1614 | WP_236595587.1 | hypothetical protein | - |
| I6I42_RS00735 (I6I42_00735) | - | 167930..168613 (-) | 684 | WP_201893471.1 | hypothetical protein | - |
| I6I42_RS00740 (I6I42_00740) | - | 168610..168873 (-) | 264 | WP_141650336.1 | hypothetical protein | - |
| I6I42_RS00745 (I6I42_00745) | - | 168855..169136 (-) | 282 | WP_201893473.1 | hypothetical protein | - |
| I6I42_RS00750 (I6I42_00750) | - | 169142..172321 (-) | 3180 | WP_201893475.1 | host specificity protein J | - |
| I6I42_RS00755 (I6I42_00755) | - | 172354..172962 (-) | 609 | WP_201893477.1 | tail assembly protein | - |
| I6I42_RS00760 (I6I42_00760) | - | 172975..173757 (-) | 783 | WP_201893479.1 | KilA-N domain-containing protein | - |
| I6I42_RS00765 (I6I42_00765) | - | 173968..174309 (-) | 342 | WP_236595588.1 | hypothetical protein | - |
| I6I42_RS00770 (I6I42_00770) | - | 174366..175073 (-) | 708 | WP_201893481.1 | C40 family peptidase | - |
| I6I42_RS00775 (I6I42_00775) | - | 175076..175834 (-) | 759 | WP_201893483.1 | phage minor tail protein L | - |
| I6I42_RS00780 (I6I42_00780) | - | 175831..176166 (-) | 336 | WP_052927722.1 | phage tail protein | - |
| I6I42_RS00785 (I6I42_00785) | - | 176163..179420 (-) | 3258 | WP_201893485.1 | phage tail tape measure protein | - |
| I6I42_RS00790 (I6I42_00790) | - | 179445..179729 (-) | 285 | WP_004238683.1 | DUF4035 domain-containing protein | - |
| I6I42_RS00795 (I6I42_00795) | - | 179741..180124 (-) | 384 | WP_015422810.1 | phage tail assembly chaperone | - |
| I6I42_RS00800 (I6I42_00800) | - | 180128..180595 (-) | 468 | WP_201893488.1 | phage tail tube protein | - |
| I6I42_RS00805 (I6I42_00805) | - | 180655..180990 (-) | 336 | WP_201893489.1 | hypothetical protein | - |
| I6I42_RS00810 (I6I42_00810) | - | 180987..181436 (-) | 450 | WP_201893490.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| I6I42_RS00815 (I6I42_00815) | - | 181429..181761 (-) | 333 | WP_052927728.1 | phage head closure protein | - |
| I6I42_RS00820 (I6I42_00820) | - | 181758..182078 (-) | 321 | WP_201893491.1 | head-tail connector protein | - |
| I6I42_RS00825 (I6I42_00825) | - | 182078..182368 (-) | 291 | WP_201894315.1 | hypothetical protein | - |
| I6I42_RS00830 (I6I42_00830) | - | 182419..183633 (-) | 1215 | WP_052927731.1 | phage major capsid protein | - |
| I6I42_RS00835 (I6I42_00835) | - | 183648..184499 (-) | 852 | WP_201893492.1 | head maturation protease, ClpP-related | - |
| I6I42_RS00840 (I6I42_00840) | - | 184505..185842 (-) | 1338 | WP_052927732.1 | phage portal protein | - |
| I6I42_RS00845 (I6I42_00845) | - | 185842..187572 (-) | 1731 | WP_201893493.1 | terminase TerL endonuclease subunit | - |
| I6I42_RS00850 (I6I42_00850) | - | 187576..188046 (-) | 471 | WP_201893494.1 | phage terminase small subunit P27 family | - |
| I6I42_RS00855 (I6I42_00855) | - | 188193..188546 (-) | 354 | WP_201893495.1 | HNH endonuclease signature motif containing protein | - |
| I6I42_RS00860 (I6I42_00860) | - | 188676..188945 (+) | 270 | WP_201893497.1 | hypothetical protein | - |
| I6I42_RS00865 (I6I42_00865) | - | 189007..189456 (-) | 450 | WP_201893499.1 | lysis protein | - |
| I6I42_RS00870 (I6I42_00870) | - | 189593..190069 (-) | 477 | WP_201893501.1 | lysozyme | - |
| I6I42_RS00875 (I6I42_00875) | - | 190062..190253 (-) | 192 | WP_004240322.1 | phage holin family protein | - |
| I6I42_RS00880 (I6I42_00880) | - | 190482..191822 (+) | 1341 | WP_236595589.1 | hypothetical protein | - |
| I6I42_RS18935 | - | 191839..191964 (+) | 126 | WP_276513080.1 | hypothetical protein | - |
| I6I42_RS00885 (I6I42_00885) | - | 192093..192530 (-) | 438 | WP_201893503.1 | antiterminator Q family protein | - |
| I6I42_RS00890 (I6I42_00890) | - | 192561..193577 (-) | 1017 | WP_201893505.1 | DUF968 domain-containing protein | - |
| I6I42_RS00895 (I6I42_00895) | - | 193577..194362 (-) | 786 | WP_036409358.1 | KilA-N domain-containing protein | - |
| I6I42_RS00900 (I6I42_00900) | - | 194380..194775 (-) | 396 | WP_036409418.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I6I42_RS00910 (I6I42_00910) | - | 194972..195370 (-) | 399 | WP_201893507.1 | hypothetical protein | - |
| I6I42_RS00915 (I6I42_00915) | - | 195367..197394 (-) | 2028 | WP_201893508.1 | phage N-6-adenine-methyltransferase | - |
| I6I42_RS00920 (I6I42_00920) | - | 197394..197636 (-) | 243 | WP_201893509.1 | hypothetical protein | - |
| I6I42_RS00925 (I6I42_00925) | - | 197633..198517 (-) | 885 | WP_201893510.1 | helix-turn-helix domain-containing protein | - |
| I6I42_RS00930 (I6I42_00930) | - | 198514..198702 (-) | 189 | WP_025155132.1 | DUF4222 domain-containing protein | - |
| I6I42_RS00935 (I6I42_00935) | - | 198699..198890 (-) | 192 | WP_201893511.1 | hypothetical protein | - |
| I6I42_RS00940 (I6I42_00940) | - | 198954..199409 (-) | 456 | WP_025155134.1 | YmfL family putative regulatory protein | - |
| I6I42_RS00945 (I6I42_00945) | - | 199448..199693 (-) | 246 | WP_054424560.1 | YdaS family helix-turn-helix protein | - |
| I6I42_RS00950 (I6I42_00950) | - | 199797..200483 (+) | 687 | WP_235557083.1 | S24 family peptidase | - |
| I6I42_RS00955 (I6I42_00955) | - | 200598..200807 (+) | 210 | WP_054424558.1 | hypothetical protein | - |
| I6I42_RS00960 (I6I42_00960) | - | 201027..201389 (+) | 363 | WP_108656652.1 | hypothetical protein | - |
| I6I42_RS00965 (I6I42_00965) | - | 201456..202283 (+) | 828 | WP_201893512.1 | DUF2303 family protein | - |
| I6I42_RS00970 (I6I42_00970) | - | 202393..202647 (+) | 255 | WP_201893518.1 | pyocin activator PrtN family protein | - |
| I6I42_RS00975 (I6I42_00975) | - | 202724..204430 (-) | 1707 | WP_201893519.1 | anti-phage dCTP deaminase | - |
| I6I42_RS00980 (I6I42_00980) | - | 204501..204695 (-) | 195 | WP_201893524.1 | hypothetical protein | - |
| I6I42_RS18940 (I6I42_00985) | - | 204862..204984 (-) | 123 | WP_276513081.1 | hypothetical protein | - |
| I6I42_RS00990 (I6I42_00990) | - | 205071..206252 (-) | 1182 | WP_201894217.1 | multidrug effflux MFS transporter | - |
| I6I42_RS00995 (I6I42_00995) | - | 207013..207225 (+) | 213 | WP_004241538.1 | helix-turn-helix transcriptional regulator | - |
| I6I42_RS01000 (I6I42_01000) | - | 207280..207633 (+) | 354 | WP_004241537.1 | helix-turn-helix transcriptional regulator | - |
| I6I42_RS01005 (I6I42_01005) | - | 207669..208139 (-) | 471 | WP_024475157.1 | YbaK/EbsC family protein | - |
| I6I42_RS01010 (I6I42_01010) | zur | 208316..208834 (+) | 519 | WP_024475156.1 | zinc uptake transcriptional repressor Zur | - |
| I6I42_RS01015 (I6I42_01015) | lexA | 208913..209527 (-) | 615 | WP_004238270.1 | transcriptional repressor LexA | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 18770.82 Da Isoelectric Point: 4.9567
>NTDB_id=527523 I6I42_RS00665 WP_004238253.1 151384..151905(-) (ssb) [Morganella morganii strain FDAARGOS_1085]
MASRGVNKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLKKGSQVYI
EGSLQTRKWQDQSGQERYTTEVVVNIGGSMQMLGGRSGGGDNMSQGGGWGQPQQPQQSQQFSGGGNPRPAQQPAAAAPQS
NEPPMDFDDDIPF
MASRGVNKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLKKGSQVYI
EGSLQTRKWQDQSGQERYTTEVVVNIGGSMQMLGGRSGGGDNMSQGGGWGQPQQPQQSQQFSGGGNPRPAQQPAAAAPQS
NEPPMDFDDDIPF
Nucleotide
Download Length: 522 bp
>NTDB_id=527523 I6I42_RS00665 WP_004238253.1 151384..151905(-) (ssb) [Morganella morganii strain FDAARGOS_1085]
ATGGCCAGCAGAGGCGTCAACAAAGTCATTCTTATCGGGAACCTGGGTCAGGATCCGGAAGTGCGTTACATGCCTAACGG
CGGTGCGGTTACCAACATCACACTGGCGACATCAGAATCATGGCGTGATAAACAAACCGGCGAAATGAAAGAGAAGACCG
AATGGCACCGTGTGGTGATCTTCGGCAAACTGGCAGAAATTGCCGGTGAATATCTGAAAAAAGGTTCACAGGTTTATATC
GAAGGTTCACTCCAGACCCGCAAATGGCAGGATCAGAGCGGCCAGGAGCGTTACACCACGGAAGTCGTGGTGAATATCGG
CGGCAGCATGCAGATGCTGGGCGGCCGCAGCGGCGGTGGCGACAATATGTCTCAGGGCGGCGGCTGGGGTCAGCCACAGC
AGCCACAACAATCCCAGCAGTTCAGCGGCGGCGGCAACCCGCGCCCGGCACAGCAGCCGGCAGCAGCAGCGCCGCAAAGC
AATGAACCGCCAATGGATTTTGATGACGATATTCCGTTCTGA
ATGGCCAGCAGAGGCGTCAACAAAGTCATTCTTATCGGGAACCTGGGTCAGGATCCGGAAGTGCGTTACATGCCTAACGG
CGGTGCGGTTACCAACATCACACTGGCGACATCAGAATCATGGCGTGATAAACAAACCGGCGAAATGAAAGAGAAGACCG
AATGGCACCGTGTGGTGATCTTCGGCAAACTGGCAGAAATTGCCGGTGAATATCTGAAAAAAGGTTCACAGGTTTATATC
GAAGGTTCACTCCAGACCCGCAAATGGCAGGATCAGAGCGGCCAGGAGCGTTACACCACGGAAGTCGTGGTGAATATCGG
CGGCAGCATGCAGATGCTGGGCGGCCGCAGCGGCGGTGGCGACAATATGTCTCAGGGCGGCGGCTGGGGTCAGCCACAGC
AGCCACAACAATCCCAGCAGTTCAGCGGCGGCGGCAACCCGCGCCCGGCACAGCAGCCGGCAGCAGCAGCGCCGCAAAGC
AATGAACCGCCAATGGATTTTGATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
69.73 |
100 |
0.746 |
| ssb | Glaesserella parasuis strain SC1401 |
57.297 |
100 |
0.613 |
| ssb | Neisseria meningitidis MC58 |
48.864 |
100 |
0.497 |
| ssb | Neisseria gonorrhoeae MS11 |
48.864 |
100 |
0.497 |