Detailed information NTG0527415

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: K6973_RS00815
• Genome accession: NZ_CP082206
• Coordinates: 131598..132038 (+)
• Length: 146 a.a.
• NCBI ID: WP_138124417.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain DY107
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 126598..137038

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6973_RS00785 (K6973_00785)	-	128255..128620 (+)	366	WP_218655016.1	DUF1033 family protein	-
K6973_RS00790 (K6973_00790)	comGA	128725..129666 (+)	942	WP_138124405.1	competence type IV pilus ATPase ComGA	Machinery gene
K6973_RS00795 (K6973_00795)	comGB	129602..130633 (+)	1032	WP_138126921.1	competence type IV pilus assembly protein ComGB	Machinery gene
K6973_RS00800 (K6973_00800)	comGC	130635..130961 (+)	327	WP_138124408.1	competence type IV pilus major pilin ComGC	Machinery gene
K6973_RS00805 (K6973_00805)	comGD	130936..131364 (+)	429	WP_256867133.1	competence type IV pilus minor pilin ComGD	Machinery gene
K6973_RS00810 (K6973_00810)	comGE	131372..131617 (+)	246	WP_242002881.1	competence type IV pilus minor pilin ComGE	Machinery gene
K6973_RS00815 (K6973_00815)	comGF	131598..132038 (+)	441	WP_138124417.1	competence type IV pilus minor pilin ComGF	Machinery gene
K6973_RS00820 (K6973_00820)	comGG	132067..132390 (+)	324	WP_256867134.1	competence type IV pilus minor pilin ComGG	-
K6973_RS00825 (K6973_00825)	comGH	132453..133406 (+)	954	WP_138124423.1	class I SAM-dependent methyltransferase	Machinery gene
K6973_RS00830 (K6973_00830)	-	133465..134661 (+)	1197	WP_084916957.1	acetate kinase	-
K6973_RS00835 (K6973_00835)	-	134967..135173 (+)	207	WP_003058508.1	helix-turn-helix transcriptional regulator	-
K6973_RS00840 (K6973_00840)	-	135276..135956 (+)	681	WP_218655018.1	type II CAAX endopeptidase family protein	-
K6973_RS00845 (K6973_00845)	-	135974..136411 (+)	438	WP_012766452.1	hypothetical protein	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 16964.49 Da
• Isoelectric Point: 10.5665

>NTDB_id=527415 K6973_RS00815 WP_138124417.1 131598..132038(+) (comGF) [Streptococcus dysgalactiae strain DY107]
MKKRTGRVQAFTFLEALIALLVISGSLLVYQGLTKTLLSHSRYLTNHDQDHWLLFSQQLREELSGARFHKVENNKLYIDK
GKKKLVLGQFKSHDFRKSAGNGQGYQPMLFGLSHSHIQAEQSRIRITLHWKSGLERTFYYAFQDQP

Nucleotide

• Length: 441 bp

>NTDB_id=527415 K6973_RS00815 WP_138124417.1 131598..132038(+) (comGF) [Streptococcus dysgalactiae strain DY107]
TTGAAAAAAAGGACAGGTAGGGTCCAAGCATTTACTTTTTTAGAGGCTTTAATTGCCTTGCTGGTGATATCAGGTTCTCT
TCTAGTGTATCAAGGATTGACCAAAACACTCCTTAGCCACAGTCGCTACCTTACCAACCATGATCAAGACCATTGGCTTT
TGTTCTCCCAGCAGTTACGAGAAGAGTTAAGTGGAGCGCGATTTCACAAAGTAGAAAACAATAAATTATATATCGACAAA
GGCAAGAAAAAACTAGTTTTAGGACAATTTAAAAGCCATGACTTTCGAAAATCGGCAGGCAATGGACAAGGTTATCAACC
CATGCTGTTTGGCCTGTCTCATAGTCATATACAAGCAGAGCAGTCTCGTATTCGGATTACCCTTCACTGGAAAAGTGGAC
TAGAAAGGACCTTCTACTATGCGTTTCAAGACCAACCTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (40-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	47.482	95.205	0.452
comGF	Streptococcus mutans UA140	46.763	95.205	0.445
comGF	Lactococcus lactis subsp. cremoris KW2	47.101	94.521	0.445
comGF/cglF	Streptococcus pneumoniae D39	43.796	93.836	0.411
comGF/cglF	Streptococcus mitis NCTC 12261	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae TIGR4	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae R6	43.796	93.836	0.411
comGF/cglF	Streptococcus mitis SK321	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae Rx1	43.796	93.836	0.411