Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   I6J14_RS02330 Genome accession   NZ_CP068057
Coordinates   480889..482199 (+) Length   436 a.a.
NCBI ID   WP_115252901.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 475889..487199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS02315 (I6J14_02315) phoU 476627..477280 (+) 654 WP_003050946.1 phosphate signaling complex protein PhoU -
  I6J14_RS02320 (I6J14_02320) - 477480..480017 (+) 2538 WP_003050944.1 M1 family metallopeptidase -
  I6J14_RS02325 (I6J14_02325) ciaR 480222..480896 (+) 675 WP_003050941.1 response regulator transcription factor Regulator
  I6J14_RS02330 (I6J14_02330) ciaH 480889..482199 (+) 1311 WP_115252901.1 HAMP domain-containing sensor histidine kinase Regulator
  I6J14_RS02335 (I6J14_02335) rpsT 482357..482605 (-) 249 WP_009881183.1 30S ribosomal protein S20 -
  I6J14_RS02340 (I6J14_02340) coaA 482659..483579 (-) 921 WP_003050936.1 type I pantothenate kinase -
  I6J14_RS02345 (I6J14_02345) - 483848..484447 (+) 600 WP_037584951.1 class I SAM-dependent methyltransferase -
  I6J14_RS02350 (I6J14_02350) - 484434..485711 (+) 1278 WP_003050932.1 pyrimidine-nucleoside phosphorylase -
  I6J14_RS02355 (I6J14_02355) deoC 485727..486389 (+) 663 WP_115252900.1 deoxyribose-phosphate aldolase -
  I6J14_RS02360 (I6J14_02360) - 486376..486765 (+) 390 WP_003050928.1 cytidine deaminase -

Sequence

Protein


Download         Length: 436 a.a.        Molecular weight: 49834.38 Da        Isoelectric Point: 8.2353

>NTDB_id=526711 I6J14_RS02330 WP_115252901.1 480889..482199(+) (ciaH) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MNKLKKEVLSDQYTHFFHFFAVFTGIFVVMTIIILQIMRFGVYSSVDSSLISVSNNASSYANRTMARISSFYFDAENNVI
KPLPDSDNSKLVGTPAANTDIILFSANGTILNSFDAFSNYQNFHLDKRQLGTIVTTSLMNFYGQEEKYHTITVRVHIRNY
PAVAYMMAVVNVEQLDSANERYEQIIIIVMIIFWLISILASIYLSKWSRKPILESYEKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILENSEHLASSLDEVRNMRILTTNLLNLARRDDGINPQWTDLDATFFDAVFENYQLVAEENGKVFLFEN
QVNRTLKMDKALLKQLMTILFDNAIKYTDKEGVVDIKVKTTEKNLLISVIDNGPGIKDEEKKKIFDRFYRVDKARTRQTG
GFGLGLALAQQIVISLKGSISVKDNLPKGSIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=526711 I6J14_RS02330 WP_115252901.1 480889..482199(+) (ciaH) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGAATAAATTAAAAAAAGAAGTCCTCTCTGATCAATACACCCATTTTTTTCATTTTTTTGCGGTTTTTACAGGTATTTT
TGTTGTGATGACCATCATTATTTTGCAGATTATGCGATTTGGTGTGTATTCTTCTGTCGATAGTAGTCTGATTTCTGTTA
GTAATAATGCAAGCAGTTATGCCAATCGTACTATGGCTAGAATATCTTCTTTTTACTTTGATGCAGAAAATAATGTCATT
AAACCTTTGCCTGATTCAGACAATTCAAAGTTAGTAGGAACACCGGCGGCAAATACAGATATTATCCTATTTAGTGCCAA
TGGCACAATTTTGAATTCCTTTGATGCTTTTTCCAATTATCAAAATTTTCATTTAGACAAGCGACAATTAGGGACGATTG
TTACCACTAGCCTGATGAATTTTTACGGTCAAGAGGAGAAGTATCATACCATAACAGTAAGGGTTCATATTAGAAATTAC
CCAGCTGTGGCATATATGATGGCAGTTGTCAACGTTGAGCAGTTGGACAGTGCCAACGAACGCTACGAACAAATTATTAT
CATTGTGATGATTATCTTCTGGTTAATTTCTATTTTGGCAAGTATTTATTTGTCCAAGTGGAGTCGAAAGCCGATTTTGG
AAAGTTACGAAAAACAAAAAATGTTTGTGGAAAATGCTAGTCATGAATTAAGAACCCCATTGGCTGTTTTGCAAAATCGC
TTAGAGTCCCTTTTCCGGAAGCCTAATGAAACCATATTGGAAAATAGTGAACATTTGGCTTCGAGTCTAGATGAAGTTCG
AAATATGCGTATTTTAACAACTAATCTCTTAAATTTAGCAAGACGTGACGATGGGATCAACCCCCAGTGGACTGACCTGG
ACGCTACCTTTTTTGATGCTGTTTTTGAGAATTATCAGCTAGTTGCTGAAGAAAATGGCAAGGTATTTCTTTTCGAAAAT
CAAGTTAACCGCACCTTGAAAATGGACAAGGCTCTTTTGAAGCAATTGATGACGATTTTATTTGATAATGCGATTAAATA
CACGGATAAAGAAGGCGTTGTTGACATTAAGGTCAAGACAACAGAGAAAAATCTCTTGATTTCAGTCATTGATAACGGTC
CAGGAATTAAAGATGAGGAAAAGAAAAAGATTTTTGACCGTTTTTATCGCGTTGATAAAGCTAGAACCCGTCAGACTGGA
GGCTTTGGCTTAGGCTTAGCCTTAGCTCAACAGATTGTGATATCACTCAAAGGAAGTATCAGCGTTAAGGATAACCTTCC
TAAGGGTAGTATCTTTGAAGTCAAACTATAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(220-285)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(329-436)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

58.352

100

0.585
  ciaH Streptococcus pneumoniae Rx1

51.598

100

0.518
  ciaH Streptococcus pneumoniae D39

51.598

100

0.518
  ciaH Streptococcus pneumoniae R6

51.598

100

0.518
  ciaH Streptococcus pneumoniae TIGR4

51.598

100

0.518