Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | T15_RS00375 | Genome accession | NC_022665 |
| Coordinates | 62206..62796 (+) | Length | 196 a.a. |
| NCBI ID | WP_023369035.1 | Uniprot ID | - |
| Organism | Streptococcus suis T15 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 57206..67796
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| T15_RS00365 (T15_0056) | - | 58589..60112 (+) | 1524 | WP_023369029.1 | Heme/copper-type cytochrome/quinol oxidase subunit 1 | - |
| T15_RS00370 (T15_0058) | hexB | 60230..62167 (+) | 1938 | WP_023369033.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| T15_RS00375 (T15_0059) | ruvA | 62206..62796 (+) | 591 | WP_023369035.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| T15_RS00385 (T15_0060) | - | 63426..63986 (+) | 561 | WP_023369037.1 | DNA-3-methyladenine glycosylase I | - |
| T15_RS00390 (T15_0061) | - | 64060..64470 (+) | 411 | WP_023369039.1 | helix-turn-helix transcriptional regulator | - |
| T15_RS11200 (T15_0062) | - | 64443..65108 (+) | 666 | WP_023369041.1 | CPBP family intramembrane glutamic endopeptidase | - |
| T15_RS00400 (T15_0063) | cinA | 65253..66434 (+) | 1182 | WP_023369043.1 | competence/damage-inducible protein A | Machinery gene |
| T15_RS00405 (T15_0064) | recA | 66486..67634 (+) | 1149 | WP_023369045.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21729.06 Da Isoelectric Point: 5.0800
>NTDB_id=52484 T15_RS00375 WP_023369035.1 62206..62796(+) (ruvA) [Streptococcus suis T15]
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGSVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGSVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
Nucleotide
Download Length: 591 bp
>NTDB_id=52484 T15_RS00375 WP_023369035.1 62206..62796(+) (ruvA) [Streptococcus suis T15]
ATGTACGACTATATTAAAGGAATCTTAACAAAAATAACTGCAAAATACATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAACCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAAGTGATTCGAG
AAGATGCTCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACAGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATTGAGCAGAAGAACATTAC
CTACCTGACCAAGTTTCCGAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACCTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCTGGTTCTGTTCAACAAGTAGCACCATCCAGTGAAAACATCGCCCTCGAAGAAGCCATGGAAGCCATGGAA
GCTCTTGGTTACCGCCCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
ATGTACGACTATATTAAAGGAATCTTAACAAAAATAACTGCAAAATACATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAACCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAAGTGATTCGAG
AAGATGCTCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACAGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATTGAGCAGAAGAACATTAC
CTACCTGACCAAGTTTCCGAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACCTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCTGGTTCTGTTCAACAAGTAGCACCATCCAGTGAAAACATCGCCCTCGAAGAAGCCATGGAAGCCATGGAA
GCTCTTGGTTACCGCCCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae R6 |
75.635 |
100 |
0.76 |
| ruvA | Streptococcus pneumoniae D39 |
75.635 |
100 |
0.76 |
| ruvA | Streptococcus pneumoniae TIGR4 |
75.635 |
100 |
0.76 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
40.394 |
100 |
0.418 |