Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   JFY49_RS01095 Genome accession   NZ_CP067019
Coordinates   237337..238482 (-) Length   381 a.a.
NCBI ID   WP_180042918.1    Uniprot ID   A0A7T7R721
Organism   Acinetobacter sp. CS-2     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 232337..243482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JFY49_RS01070 (JFY49_01070) - 233027..233572 (-) 546 WP_086196630.1 glutathione peroxidase -
  JFY49_RS01075 (JFY49_01075) - 233724..234266 (-) 543 WP_180042914.1 hypothetical protein -
  JFY49_RS01080 (JFY49_01080) - 234456..235208 (-) 753 WP_180176443.1 AraC family transcriptional regulator -
  JFY49_RS01085 (JFY49_01085) - 235392..236306 (+) 915 WP_180042916.1 DMT family transporter -
  JFY49_RS01090 (JFY49_01090) - 236725..237294 (-) 570 WP_180042917.1 L-threonylcarbamoyladenylate synthase -
  JFY49_RS01095 (JFY49_01095) dprA 237337..238482 (-) 1146 WP_180042918.1 DNA-processing protein DprA Machinery gene
  JFY49_RS01100 (JFY49_01100) tsaP 238577..239731 (-) 1155 WP_180042919.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  JFY49_RS01105 (JFY49_01105) def 239851..240381 (+) 531 WP_086196623.1 peptide deformylase -
  JFY49_RS01110 (JFY49_01110) - 240475..240897 (+) 423 WP_180042920.1 DUF2946 family protein -
  JFY49_RS01115 (JFY49_01115) - 240985..242997 (+) 2013 WP_180082085.1 TonB-dependent copper receptor -

Sequence


Protein


Download         Length: 381 a.a.        Molecular weight: 43001.06 Da        Isoelectric Point: 6.5814

>NTDB_id=524456 JFY49_RS01095 WP_180042918.1 237337..238482(-) (dprA) [Acinetobacter sp. CS-2]
MLNSLSALQLDYIRLWFLVQHSLPSFYKIQEYYTHLAEATQPDQIETWQKLGIHKNHIQRLRDFHLPESQRQFQHCIDLI
QKQSDFVLLQDDAHYPQQLLPYADKPPILFGQGNVQTLLQAQIAIVGSRKPSNHGRQVAYDFAYYLSEKGFYISSGLAQG
IDEAAHQGALQHNRTIAVMGTGLDLTYPSQNQPLRQQILAQAGTVITEFLPGTPPLQQHFPRRNRIVSALSLGVIVAEAA
LKSGSLITAKWAAEQGKLIFAIPGHIYSEHHQGCHQLIREGAILVDHPEQVIEDLALPTQWHTQQHSEQASKLAPLDTQP
ELPAHLSVLYNQLDWIGQHLDELVIQLQLDIATLTSQLMELELLGLCTQQAGMYLRCRPGK

Nucleotide


Download         Length: 1146 bp        

>NTDB_id=524456 JFY49_RS01095 WP_180042918.1 237337..238482(-) (dprA) [Acinetobacter sp. CS-2]
ATGCTCAATTCCTTAAGCGCCTTGCAGCTGGATTACATTCGTTTATGGTTTCTGGTACAGCACTCTCTGCCCAGCTTTTA
TAAAATCCAGGAATACTATACCCATCTGGCCGAAGCAACACAGCCTGACCAAATTGAAACATGGCAAAAACTTGGCATTC
ACAAAAATCATATTCAGCGGCTGCGAGATTTTCATCTTCCTGAATCACAGCGGCAATTTCAGCATTGTATTGATCTGATT
CAAAAACAGAGTGATTTTGTACTGTTGCAGGATGATGCACACTACCCACAGCAACTACTGCCCTATGCCGATAAGCCGCC
GATCCTGTTTGGCCAGGGCAATGTCCAAACCCTGTTACAAGCACAAATTGCCATTGTCGGTAGCCGTAAACCCAGCAATC
ACGGACGCCAGGTGGCCTATGACTTTGCTTATTATCTCAGTGAAAAAGGCTTTTATATCAGCAGTGGCTTGGCACAAGGC
ATTGATGAAGCCGCCCATCAGGGTGCTTTGCAGCACAATCGCACCATTGCCGTGATGGGTACAGGCCTAGACCTGACCTA
TCCCAGTCAAAATCAGCCGTTGCGACAGCAGATTCTTGCTCAGGCCGGTACGGTAATCACCGAGTTCTTACCCGGAACCC
CTCCTTTACAGCAGCATTTTCCGCGGCGCAACCGCATTGTCAGTGCCTTAAGCCTCGGCGTGATTGTGGCAGAAGCTGCA
CTGAAAAGTGGTTCTTTAATCACGGCGAAATGGGCAGCGGAACAAGGCAAATTGATCTTTGCCATTCCAGGACATATTTA
TAGCGAGCATCATCAAGGCTGCCATCAACTGATTCGTGAAGGTGCCATTTTAGTGGATCATCCTGAACAGGTGATTGAAG
ATCTGGCCCTGCCGACACAATGGCATACGCAACAGCACAGCGAACAGGCCAGCAAACTTGCCCCTTTGGATACCCAACCC
GAACTGCCAGCGCATTTAAGCGTTTTGTACAATCAGCTAGACTGGATCGGACAACATCTGGATGAACTGGTCATTCAACT
GCAGTTAGACATTGCCACCCTGACCAGTCAATTGATGGAACTGGAATTACTTGGCTTGTGCACCCAACAAGCTGGCATGT
ATCTACGTTGTCGTCCAGGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7T7R721

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

64.474

99.738

0.643

  dprA Acinetobacter baumannii D1279779

64.211

99.738

0.64

  dprA Acinetobacter baylyi ADP1

61.619

100

0.619