Detailed information NTG0524378

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: I6H70_RS08930
• Genome accession: NZ_CP067013
• Coordinates: 1919122..1920459 (+)
• Length: 445 a.a.
• NCBI ID: WP_200293709.1
• Uniprot ID: A0A9X7YUA2
• Organism: Stutzerimonas balearica strain FDAARGOS_1013
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1914122..1925459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H70_RS08905 (I6H70_08905)	pgeF	1914276..1915007 (-)	732	WP_200293703.1	peptidoglycan editing factor PgeF	-
I6H70_RS08910 (I6H70_08910)	rluD	1915004..1915978 (-)	975	WP_043218532.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
I6H70_RS08915 (I6H70_08915)	-	1916126..1917118 (+)	993	WP_041107883.1	outer membrane protein assembly factor BamD	-
I6H70_RS08920 (I6H70_08920)	-	1917199..1917432 (+)	234	WP_043218531.1	PP0621 family protein	-
I6H70_RS08925 (I6H70_08925)	pilS	1917422..1919014 (+)	1593	WP_234292962.1	PAS domain-containing sensor histidine kinase	Regulator
I6H70_RS08930 (I6H70_08930)	pilR	1919122..1920459 (+)	1338	WP_200293709.1	sigma-54 dependent transcriptional regulator	Regulator
I6H70_RS08935 (I6H70_08935)	-	1920504..1921556 (-)	1053	WP_041107889.1	DUF2333 family protein	-
I6H70_RS08940 (I6H70_08940)	-	1921749..1923344 (+)	1596	WP_200293725.1	diguanylate cyclase	-
I6H70_RS08945 (I6H70_08945)	-	1923466..1925430 (+)	1965	WP_200293728.1	methyl-accepting chemotaxis protein	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49669.07 Da
• Isoelectric Point: 5.7877

>NTDB_id=524378 I6H70_RS08930 WP_200293709.1 1919122..1920459(+) (pilR) [Stutzerimonas balearica strain FDAARGOS_1013]
MSARQKALIIDDEPDIRELLEITLGRMKLDTRSARSVKEARECLSREHYDLCLTDMRLPDGSGLELVQHIQQQYPHLPVA
MITAYGSLDTAISALKAGAFDFVTKPVDLNRLRELVSTALRLRPSTPEVPSDSRLLGNSPPMETLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGARAERPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRVVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LKRLAAECGEPPARLTADALAKLESYRFPGNVRELENMLERAYTLCEDDQIKADDLRLAEAVPAADGQENNLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=524378 I6H70_RS08930 WP_200293709.1 1919122..1920459(+) (pilR) [Stutzerimonas balearica strain FDAARGOS_1013]
ATGAGCGCCCGCCAGAAAGCCCTGATCATCGATGACGAACCCGATATCCGCGAACTGCTGGAGATCACCCTAGGGCGCAT
GAAGCTCGACACGCGCAGCGCCCGCAGCGTCAAGGAGGCGCGCGAGTGCCTCAGCCGCGAGCATTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCTCCGGCCTGGAACTGGTACAGCACATACAGCAGCAGTACCCGCATCTGCCGGTCGCG
ATGATCACCGCGTACGGCAGCCTCGATACGGCAATCAGCGCACTGAAAGCGGGCGCTTTCGACTTCGTCACCAAACCGGT
GGATCTCAACCGTCTGCGCGAGCTCGTCAGCACGGCACTGCGCCTGCGCCCAAGCACCCCGGAAGTACCCAGCGACAGTC
GCCTGCTGGGCAACTCGCCGCCGATGGAGACGCTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGTCAGGCTCCGGTGTAT
ATCAGCGGCGAGTCCGGCAGCGGCAAGGAGCTGGTCGCGCGCCTGATCCACGAGCAGGGCGCACGCGCAGAGCGGCCTTT
CGTCCCGGTCAACTGCGGTGCGATCCCATCGGAGCTGATGGAGAGCGAGTTCTTCGGACACAAGAAAGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCGGGGCTGTTCCAGGCCGCCAATGGCGGCACGCTGTTCCTCGACGAGGTCGCCGACCTGCCT
TTACCCATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAAGCCGTGCGCGTGGTTGGCGGCGCTCAGGAGGTCATGGT
CGATGTGCGCATCCTCTGCGCCACGCACAAGGATCTCGCCAGCGAAGTGGCGGCCGGGCGCTTCCGCCAGGACCTCTATT
ACCGCCTGAACGTCATCGAACTGCGCGTGCCGCCGCTGCGCGAGCGTCGCGAAGACATCGGTTTGCTGGCCGACGTAATG
CTCAAGCGCCTGGCGGCCGAGTGCGGCGAGCCGCCGGCACGGCTGACAGCCGATGCACTGGCCAAGCTGGAGAGTTATCG
CTTCCCCGGCAACGTCCGCGAACTGGAAAACATGCTCGAGCGCGCCTACACGCTTTGCGAAGACGACCAGATCAAGGCCG
ACGACCTGCGCCTGGCCGAGGCGGTGCCGGCAGCCGACGGCCAGGAGAACAACCTGGCGCAGATCGACAACCTGGAAGAC
CATCTGGAAGAGATCGAACGCAAACTGATCATGCAGGCGCTGGAGGAGACGCGCTGGAACCGCACCGCCGCCGCACAGCG
CCTGGGGCTGACTTTCCGCTCGATGCGCTACCGGCTGAAAAAGCTCGGCCTAGATTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	83.784	99.775	0.836
pilR	Acinetobacter baumannii strain A118	50.98	100	0.526
luxO	Vibrio cholerae strain A1552	36.689	100	0.369