Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | LPV_RS04930 | Genome accession | NC_018140 |
| Coordinates | 1062839..1063438 (+) | Length | 199 a.a. |
| NCBI ID | WP_014843600.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1057839..1068438
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPV_RS04915 (LPV_1063) | - | 1059786..1060793 (-) | 1008 | WP_014843598.1 | hypothetical protein | - |
| LPV_RS04920 (LPV_1064) | pilM | 1061209..1062273 (+) | 1065 | WP_014843599.1 | type IV pilus assembly protein PilM | Machinery gene |
| LPV_RS04925 (LPV_1065) | pilN | 1062277..1062825 (+) | 549 | WP_011213354.1 | PilN domain-containing protein | Machinery gene |
| LPV_RS04930 (LPV_1066) | pilO | 1062839..1063438 (+) | 600 | WP_014843600.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LPV_RS04935 (LPV_1067) | pilP | 1063435..1064019 (+) | 585 | WP_014843601.1 | pilus assembly protein PilP | Machinery gene |
| LPV_RS04940 (LPV_1068) | pilQ | 1064023..1066119 (+) | 2097 | WP_014843602.1 | type IV pilus secretin PilQ | Machinery gene |
| LPV_RS04945 (LPV_1069) | aroK | 1066565..1067092 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| LPV_RS04950 (LPV_1070) | aroB | 1067079..1068188 (+) | 1110 | WP_014843603.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22533.28 Da Isoelectric Point: 5.3369
>NTDB_id=52162 LPV_RS04930 WP_014843600.1 1062839..1063438(+) (pilO) [Legionella pneumophila subsp. pneumophila]
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVPSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVPSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=52162 LPV_RS04930 WP_014843600.1 1062839..1063438(+) (pilO) [Legionella pneumophila subsp. pneumophila]
ATGGACACGGTCAATTTAAATGAATTAACTCTAGAGAATGTTGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGACTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGCTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTTCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAGGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGCCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAATGAATTAACTCTAGAGAATGTTGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGACTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGCTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTTCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAGGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGCCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
99.497 |
100 |
0.995 |
| comO | Acinetobacter baylyi ADP1 |
39.791 |
95.98 |
0.382 |
| pilO | Acinetobacter baumannii D1279779 |
38.743 |
95.98 |
0.372 |