Detailed information NTG0052055

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: YB51_RS09640
• Genome accession: NC_022516
• Coordinates: 1960876..1962162 (+)
• Length: 428 a.a.
• NCBI ID: WP_002939120.1
• Uniprot ID: -
• Organism: Streptococcus suis YB51
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1955876..1967162

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YB51_RS09615 (YB51_9620)	-	1956404..1957666 (-)	1263	WP_002939093.1	hypothetical protein	-
YB51_RS09620 (YB51_9625)	-	1957680..1958426 (-)	747	WP_013730656.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
YB51_RS09625 (YB51_9630)	prmA	1958428..1959381 (-)	954	WP_002939103.1	50S ribosomal protein L11 methyltransferase	-
YB51_RS09630	-	1959977..1960330 (-)	354	WP_009910982.1	ASCH domain-containing protein	-
YB51_RS09635 (YB51_9635)	-	1960332..1960802 (-)	471	WP_002939116.1	DUF3013 family protein	-
YB51_RS09640 (YB51_9640)	rarA	1960876..1962162 (+)	1287	WP_002939120.1	replication-associated recombination protein A	Machinery gene
YB51_RS09650 (YB51_9645)	nrdG	1962643..1963200 (-)	558	WP_002939123.1	anaerobic ribonucleoside-triphosphate reductase activating protein	-
YB51_RS09660 (YB51_9650)	-	1963387..1963881 (-)	495	WP_002939125.1	GNAT family N-acetyltransferase	-
YB51_RS09665 (YB51_9655)	-	1963883..1965229 (-)	1347	WP_009910991.1	bifunctional metallophosphatase/5'-nucleotidase	-
YB51_RS10900 (YB51_9660)	-	1965231..1965365 (-)	135	WP_002939130.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 47301.95 Da
• Isoelectric Point: 6.4389

>NTDB_id=52055 YB51_RS09640 WP_002939120.1 1960876..1962162(+) (rarA) [Streptococcus suis YB51]
MPANLALRMRPKSIDEVIGQEHLVGPGKIIRRMIDANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATTDNQKRL
QEIAEEAKFSGGLVLMLDEIHRLNKTKQDFLLPLLENGNIIMIGATTENPFFSILPAIRSRVQIFELQPLKTSHIRQALE
LALTDSERGFDFPVTIEPEALDFLANATNGDLRAAYNSLELAVLSTKESDDGSRHIDLDAVENSLQKSYISMDKNGDAHY
DILSALQKSIRGSDVNASLHYAARLIEAEDLPSLARRLTVIAYEDIGLANPEAQIHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRKNGHLPIPNHLRDGHYAGSKELGNAIGYQYPHAYPEKWVDQQYLPDKLLAADYFTA
NDTGKYERALGMTQEKIKNLKKNRRQNP

Nucleotide

• Length: 1287 bp

>NTDB_id=52055 YB51_RS09640 WP_002939120.1 1960876..1962162(+) (rarA) [Streptococcus suis YB51]
ATGCCAGCCAATCTCGCCCTTCGTATGCGGCCCAAATCCATTGATGAAGTCATCGGTCAGGAACACCTGGTCGGTCCTGG
AAAGATTATCCGTCGCATGATTGATGCCAATATGCTGTCGTCCATGATTCTCTACGGTCCGCCAGGGATTGGTAAGACCT
CGATTGCGTCCGCCATTGCTGGTACGACCAAGTATGCCTTTCGAACCTTTAATGCCACGACAGACAACCAAAAACGCCTG
CAGGAAATCGCTGAAGAAGCTAAATTTTCTGGTGGCCTGGTCCTCATGCTCGATGAAATCCACCGCCTCAACAAGACTAA
ACAGGACTTCCTGCTTCCTCTTTTGGAAAACGGCAATATCATCATGATTGGAGCAACGACGGAAAATCCCTTCTTCTCAA
TTTTGCCTGCCATTCGCAGTCGGGTGCAGATTTTTGAATTACAACCTTTGAAAACCAGTCACATCCGACAGGCCTTGGAA
CTGGCTCTGACAGACAGCGAACGTGGTTTTGATTTTCCCGTCACCATTGAACCTGAGGCCCTGGATTTTCTGGCAAATGC
GACAAACGGTGACCTTCGTGCCGCTTACAATTCTCTAGAACTGGCTGTGCTTTCGACCAAGGAAAGTGACGACGGTAGCC
GCCACATTGATCTGGACGCCGTGGAAAATAGCCTGCAAAAGTCCTACATCAGCATGGACAAGAACGGCGATGCCCACTAC
GATATCCTCTCCGCCCTACAAAAATCCATTCGAGGTAGCGATGTCAATGCCAGCCTCCACTACGCCGCTCGTTTGATTGA
GGCCGAAGATCTGCCTAGTCTGGCCCGTCGCTTGACGGTCATTGCCTACGAAGACATCGGCTTGGCCAATCCAGAGGCTC
AGATTCATACGGTGACGGCCCTTGAAGCCGCCCAGAAAATTGGCTTTCCAGAGGCACGCATTTTGATTGCCAATGTGGTG
ATTGATTTGGCTCTTTCTCCCAAGTCCAATTCTGCCTATCTGGCTATGGATGCAGCTCTGGCTGATTTGCGGAAAAACGG
CCATCTGCCCATTCCAAATCATCTTCGGGATGGCCACTATGCTGGCAGCAAGGAGCTGGGAAATGCTATTGGCTACCAGT
ATCCGCATGCCTATCCTGAAAAATGGGTGGACCAGCAATACCTGCCCGATAAGTTACTAGCTGCGGACTACTTCACCGCC
AACGACACTGGAAAATACGAGCGTGCCTTGGGCATGACACAAGAAAAGATAAAAAATTTGAAAAAAAATAGACGCCAAAA
TCCTTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.809	97.664	0.584