Detailed information NTG0519321

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JFU10_RS07980
• Genome accession: NZ_CP066337
• Coordinates: 1671989..1673152 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Mr12
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1666989..1678152

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JFU10_RS07950	-	1667254..1667673 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
JFU10_RS07955	comFC	1667747..1668436 (-)	690	WP_198863951.1	phosphoribosyltransferase family protein	Machinery gene
JFU10_RS07960	-	1668442..1668726 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
JFU10_RS07965	comFA	1668784..1670169 (-)	1386	WP_198863912.1	DEAD/DEAH box helicase	Machinery gene
JFU10_RS07970	-	1670277..1671125 (-)	849	WP_198863913.1	DegV family protein	-
JFU10_RS07975	degU	1671223..1671912 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
JFU10_RS07980	degS	1671989..1673152 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
JFU10_RS07985	-	1673375..1674022 (+)	648	WP_060657503.1	YigZ family protein	-
JFU10_RS07990	-	1674027..1675241 (+)	1215	WP_070082459.1	LCP family protein	-
JFU10_RS07995	-	1675331..1676407 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
JFU10_RS08000	tuaH	1676540..1677736 (-)	1197	WP_128574994.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=519321 JFU10_RS07980 WP_003151385.1 1671989..1673152(-) (degS) [Bacillus velezensis strain Mr12]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=519321 JFU10_RS07980 WP_003151385.1 1671989..1673152(-) (degS) [Bacillus velezensis strain Mr12]
ATGAACAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948