Detailed information NTG0518742

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: JCR17_RS14760
• Genome accession: NZ_CP066235
• Coordinates: 3050565..3051683 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain G20AB009
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3045565..3056683

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JCR17_RS14750 (JCR17_14750)	-	3048681..3049373 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
JCR17_RS14755 (JCR17_14755)	pilT	3049500..3050537 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
JCR17_RS14760 (JCR17_14760)	pilU	3050565..3051683 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
JCR17_RS14765 (JCR17_14765)	fur	3051753..3052190 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
JCR17_RS14770 (JCR17_14770)	-	3052302..3052700 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
JCR17_RS14775 (JCR17_14775)	-	3052755..3053078 (-)	324	WP_000442587.1	RnfH family protein	-
JCR17_RS14780 (JCR17_14780)	-	3053078..3054145 (-)	1068	WP_002019572.1	hypothetical protein	-
JCR17_RS14785 (JCR17_14785)	-	3054298..3054753 (-)	456	WP_000782976.1	bacteriohemerythrin	-
JCR17_RS14790 (JCR17_14790)	-	3055006..3055854 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=518742 JCR17_RS14760 WP_000347039.1 3050565..3051683(+) (pilU) [Acinetobacter baumannii strain G20AB009]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=518742 JCR17_RS14760 WP_000347039.1 3050565..3051683(+) (pilU) [Acinetobacter baumannii strain G20AB009]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395