Detailed information NTG0518536

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JD965_RS17385
• Genome accession: NZ_CP066219
• Coordinates: 3405039..3406202 (-)
• Length: 387 a.a.
• NCBI ID: WP_047475788.1
• Uniprot ID: -
• Organism: Bacillus siamensis strain B28
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3400039..3411202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JD965_RS17355 (JD965_17355)	-	3400304..3400723 (-)	420	WP_047475784.1	TIGR03826 family flagellar region protein	-
JD965_RS17360 (JD965_17360)	comFC	3400797..3401486 (-)	690	WP_198527120.1	phosphoribosyltransferase family protein	Machinery gene
JD965_RS17365 (JD965_17365)	-	3401492..3401776 (-)	285	WP_016937770.1	late competence development ComFB family protein	-
JD965_RS17370 (JD965_17370)	comFA	3401834..3403219 (-)	1386	WP_047475786.1	DEAD/DEAH box helicase	Machinery gene
JD965_RS17375 (JD965_17375)	-	3403327..3404175 (-)	849	WP_047475787.1	DegV family protein	-
JD965_RS17380 (JD965_17380)	degU	3404273..3404962 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
JD965_RS17385 (JD965_17385)	degS	3405039..3406202 (-)	1164	WP_047475788.1	two-component sensor histidine kinase DegS	Regulator
JD965_RS17390 (JD965_17390)	-	3406425..3407072 (+)	648	WP_047475789.1	YigZ family protein	-
JD965_RS17395 (JD965_17395)	-	3407077..3408309 (+)	1233	WP_047475790.1	LCP family protein	-
JD965_RS17400 (JD965_17400)	-	3408408..3409484 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
JD965_RS17405 (JD965_17405)	tuaH	3409617..3410813 (-)	1197	WP_198698155.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.85 Da
• Isoelectric Point: 7.1379

>NTDB_id=518536 JD965_RS17385 WP_047475788.1 3405039..3406202(-) (degS) [Bacillus siamensis strain B28]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKEAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=518536 JD965_RS17385 WP_047475788.1 3405039..3406202(-) (degS) [Bacillus siamensis strain B28]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAAGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTTAAACAGATCAAACAGCAGG
TCTACGAAGTGATTGAGCTGGGCGACAAACTTGAAGTTCATACTCGGCACGCAAGAAACCGTTTGTCTGAAGTAAGCAGG
AATTTCCATAAGTTCAGCGAAGAAGAGATTCGTAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
TCAGCAGCGTGAAAAACAGCTGCGGGAGCGCAGGGATGATCTGGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGTCAAGTAGGGCTTCTGCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTGATAGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGCTTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCTCTCAAACATTCAGAATCAGAGGAAATTACGGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGAAGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951