Detailed information NTG0518346

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: JC775_RS09925
• Genome accession: NZ_CP066192
• Coordinates: 2001395..2002108 (+)
• Length: 237 a.a.
• NCBI ID: WP_048722965.1
• Uniprot ID: A0AAX2CGP3
• Organism: Bacillus cytotoxicus strain E17.4
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 1996395..2007108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JC775_RS20605	-	1996491..1996625 (+)	135	WP_235436365.1	NmrA family NAD(P)-binding protein	-
JC775_RS20610	-	1996613..1996996 (+)	384	WP_235436366.1	NAD(P)H-binding protein	-
JC775_RS09900 (JC775_09900)	-	1997395..1998207 (+)	813	WP_012094306.1	MerR family transcriptional regulator	-
JC775_RS09905 (JC775_09905)	-	1998552..1999469 (+)	918	WP_048723104.1	ABC transporter ATP-binding protein	-
JC775_RS09910 (JC775_09910)	-	1999466..2000218 (+)	753	WP_048722961.1	ABC transporter permease	-
JC775_RS09915 (JC775_09915)	-	2000231..2000962 (+)	732	WP_048722963.1	ABC transporter permease	-
JC775_RS20615	-	2001091..2001294 (+)	204	WP_235436391.1	DUF1093 domain-containing protein	-
JC775_RS09925 (JC775_09925)	scnR	2001395..2002108 (+)	714	WP_048722965.1	response regulator transcription factor	Regulator
JC775_RS09930 (JC775_09930)	-	2002109..2003515 (+)	1407	WP_048722967.1	HAMP domain-containing sensor histidine kinase	-
JC775_RS09935 (JC775_09935)	-	2003872..2004210 (-)	339	WP_087098723.1	DUF4064 domain-containing protein	-
JC775_RS09940 (JC775_09940)	-	2004227..2004730 (-)	504	WP_048722972.1	DUF4352 domain-containing protein	-
JC775_RS09945 (JC775_09945)	-	2004660..2004968 (+)	309	WP_140388422.1	hypothetical protein	-
JC775_RS09950 (JC775_09950)	abrB	2005393..2005671 (+)	279	WP_012094321.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
JC775_RS09955 (JC775_09955)	-	2005890..2006684 (+)	795	WP_048722974.1	LysM peptidoglycan-binding domain-containing protein	-
JC775_RS09960 (JC775_09960)	-	2006892..2007089 (+)	198	WP_048722977.1	hypothetical protein	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 26942.45 Da
• Isoelectric Point: 6.2727

>NTDB_id=518346 JC775_RS09925 WP_048722965.1 2001395..2002108(+) (scnR) [Bacillus cytotoxicus strain E17.4]
MGNLKDKKILIVDDEPEIRIMIERFLRKEGFFRIFSAADCTSALSLCRVDRPDIVILDVMLPDGDGFSLLSSIRQFSNMP
VLFLSARGEDEDRLLGLGLGADDYIVKPFLPRELVLRLIAVLKRVYSSPVVERLSIFQLGKQTVDLESAVVYRGETEMPL
TAKEHAILVKLYENRGRIVTSDAICQAVWGDDSYGYENTLMVHIRRVREKIEPDPSKPIYLLTVRGLGYKLLLKETH

Nucleotide

• Length: 714 bp

>NTDB_id=518346 JC775_RS09925 WP_048722965.1 2001395..2002108(+) (scnR) [Bacillus cytotoxicus strain E17.4]
ATGGGAAATTTAAAAGATAAAAAAATCTTAATTGTCGATGATGAACCAGAAATAAGAATCATGATTGAAAGGTTCTTAAG
AAAAGAGGGATTTTTCCGGATTTTTAGTGCTGCTGATTGTACGTCAGCTCTATCGCTTTGTCGTGTAGATCGGCCAGATA
TCGTTATTCTTGATGTTATGCTACCTGATGGTGACGGCTTTTCACTTTTATCTTCGATTAGGCAGTTCTCAAATATGCCG
GTTCTGTTTCTATCTGCACGAGGAGAAGATGAGGACCGGTTACTTGGATTAGGTTTAGGGGCAGATGATTATATTGTAAA
GCCGTTCTTACCACGTGAACTCGTATTACGTCTTATCGCTGTTTTAAAACGAGTCTATTCTTCTCCTGTTGTAGAGCGTC
TATCAATCTTTCAATTAGGGAAACAAACTGTGGACTTAGAAAGCGCTGTTGTGTATAGGGGTGAAACAGAAATGCCCTTA
ACAGCAAAAGAACATGCTATTCTTGTAAAGCTATATGAGAATCGAGGTCGAATTGTGACAAGCGACGCTATATGTCAAGC
AGTTTGGGGAGATGATAGCTACGGTTACGAAAATACATTAATGGTCCATATTAGGCGAGTACGTGAAAAAATTGAACCAG
ATCCCTCCAAACCGATTTATCTTCTTACTGTGAGGGGACTAGGGTATAAATTGCTTTTGAAGGAGACGCATTAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

• Response regulator receiver domain (Response_reg) (9-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	49.782	96.624	0.481
vicR	Streptococcus mutans UA159	40.611	96.624	0.392
micA	Streptococcus pneumoniae Cp1015	40.351	96.203	0.388