Detailed information NTG0518048

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: JDY60_RS04565
• Genome accession: NZ_CP066172
• Coordinates: 945719..947959 (-)
• Length: 746 a.a.
• NCBI ID: WP_200371573.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SF100
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 940719..952959

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JDY60_RS04545 (JDY60_04545)	-	942487..944151 (-)	1665	WP_200371572.1	molecular chaperone HscC	-
JDY60_RS04550 (JDY60_04550)	rplT	944325..944684 (-)	360	WP_000124830.1	50S ribosomal protein L20	-
JDY60_RS04555 (JDY60_04555)	rpmI	944736..944936 (-)	201	WP_001125942.1	50S ribosomal protein L35	-
JDY60_RS04560 (JDY60_04560)	infC	944969..945499 (-)	531	WP_000848184.1	translation initiation factor IF-3	-
JDY60_RS04565 (JDY60_04565)	comEC/celB	945719..947959 (-)	2241	WP_200371573.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JDY60_RS04570 (JDY60_04570)	comEA/celA/cilE	947943..948593 (-)	651	WP_125397719.1	helix-hairpin-helix domain-containing protein	Machinery gene
JDY60_RS04575 (JDY60_04575)	-	948660..949229 (-)	570	WP_200371575.1	GNAT family N-acetyltransferase	-
JDY60_RS04580 (JDY60_04580)	ald	949405..950517 (+)	1113	WP_200371577.1	alanine dehydrogenase	-
JDY60_RS04585 (JDY60_04585)	-	950568..951554 (-)	987	WP_084921953.1	PhoH family protein	-
JDY60_RS04590 (JDY60_04590)	-	951635..951850 (-)	216	WP_001232084.1	YozE family protein	-
JDY60_RS04595 (JDY60_04595)	-	951847..952452 (-)	606	WP_200371578.1	GrpB family protein	-

Sequence

Protein

• Length: 746 a.a.
• Molecular weight: 84789.07 Da
• Isoelectric Point: 9.2887

>NTDB_id=518048 JDY60_RS04565 WP_200371573.1 945719..947959(-) (comEC/celB) [Streptococcus oralis strain SF100]
MSQRIKNFPIPLIYLSFLLLWLYFVILGASYLALLGFVFLLVCLFFQFPWKSAGKVLAICGVFGIWFLFQNWQQTQASQN
LVDSVERVRILPDTIKVNGDSLSFRGKAEGRTFQVYYKLQSEEEKELFQALTDLHEIELEGKLSEPEGQRNFGGFDYRAY
LKTQGIYQTLTIKSIQSLKQVSSWDIGENLSALRRKAVVWIKAHFPDPMRNYMTGLLLGHLDTDFEEMNELYSSLGIIHL
FALSGMQVGFFMEAFKKLLLRLGLTQEKLKWLTYPFSLIYAGLTGFSASVIRSLLQKLLAQHGVKGLDNFALTILVLFII
MPNFFLTAGGVLSCAYAFILTMTSKEGDGIKAVARESLVISLGILPILSFYFAEFQPWSILLTFVFSFLFDVVFLPLLSI
LFILSFIYSVTQFNFVFEWLENIIRLVSQLASRPLVLGQPTTWLLILLLVSLALLYDMRKNIKRLAGFSLFIVGLFFLTK
HPLENEITMLDVGQGESIFLRDVTGKTILIDVGGKAESDKKIEAWQEKSTTSNAQRTLIPYLKSRGVDKIDQLILTNTDK
EHVGDLLEVTKAFHVGEILVSKGSLTQKEFVAELEASQNKVRSVTAGEYFPIFGSYLEVLSPRQIRDGNRDDSLVLYGKL
LDKHFFFTGNLKEKGEKDLMKHYPDLEVDVLKAGQHGAKTSSNPVFLEQLKPAITLISVGKSNRTKLPHQETLTRMESIK
SKIYRTDQQGAIRFKGWNSWRIETVR

Nucleotide

• Length: 2241 bp

>NTDB_id=518048 JDY60_RS04565 WP_200371573.1 945719..947959(-) (comEC/celB) [Streptococcus oralis strain SF100]
ATGTCACAGCGGATTAAGAATTTCCCTATCCCCTTAATCTATCTGAGTTTTCTGTTACTCTGGCTTTACTTTGTCATTTT
AGGAGCGTCCTATCTCGCACTGCTAGGTTTTGTTTTTTTGCTGGTCTGCCTCTTTTTCCAATTTCCTTGGAAATCGGCTG
GTAAAGTTCTAGCGATTTGTGGAGTTTTTGGAATTTGGTTTTTGTTTCAAAACTGGCAACAGACACAAGCTAGTCAGAAC
CTAGTGGATTCTGTTGAAAGGGTACGGATTTTACCAGATACCATCAAAGTCAATGGAGACAGTCTGTCCTTTCGGGGCAA
GGCTGAGGGCCGCACCTTCCAAGTTTATTATAAACTCCAGTCCGAGGAAGAGAAAGAGCTCTTTCAGGCCTTAACAGACC
TTCACGAGATAGAGCTAGAAGGAAAACTTTCTGAGCCTGAAGGGCAGAGAAATTTTGGTGGATTTGACTACCGAGCCTAT
CTGAAGACTCAGGGAATTTACCAGACACTGACTATCAAGAGCATCCAGTCACTTAAACAGGTTAGCAGTTGGGATATAGG
TGAAAATTTGTCGGCTTTACGTCGAAAGGCTGTAGTTTGGATCAAGGCGCACTTTCCAGACCCTATGCGCAACTATATGA
CGGGGCTCTTGCTGGGACATTTGGACACGGACTTTGAGGAGATGAATGAACTCTATTCCAGTCTTGGAATTATCCATCTC
TTTGCCTTGTCGGGTATGCAGGTGGGCTTCTTTATGGAGGCCTTTAAGAAACTCCTCTTGCGATTGGGCTTGACTCAAGA
GAAGTTGAAGTGGCTAACTTATCCATTTTCTCTTATCTATGCAGGTCTGACAGGATTTTCAGCATCTGTCATTCGCAGTC
TCTTACAAAAGTTACTGGCCCAACATGGTGTTAAAGGTTTGGATAATTTTGCCTTGACGATCCTTGTCCTCTTTATCATC
ATGCCCAACTTTTTCTTGACAGCTGGAGGGGTCTTGTCCTGCGCTTATGCTTTTATCTTGACTATGACTAGCAAAGAAGG
CGATGGGATCAAGGCTGTTGCCAGAGAAAGTCTGGTCATTTCTTTGGGAATATTGCCTATTCTATCCTTCTATTTTGCAG
AATTTCAGCCTTGGTCTATCCTTTTGACCTTTGTCTTTTCCTTTCTGTTTGATGTGGTCTTCTTGCCGCTTTTGTCCATC
TTATTCATTCTGTCTTTTATTTACTCAGTCACTCAGTTTAACTTTGTTTTTGAGTGGTTGGAGAACATCATTCGCTTGGT
ATCGCAGCTGGCAAGTAGGCCCCTGGTCCTTGGTCAACCCACCACATGGCTTTTGATTCTCCTCTTAGTTTCATTAGCCT
TGCTATATGATATGAGGAAAAACATTAAAAGACTAGCAGGATTCAGTCTCTTTATTGTGGGGCTCTTTTTCTTGACCAAG
CATCCACTGGAAAATGAAATCACCATGCTGGATGTGGGGCAAGGTGAAAGTATTTTCCTACGGGATGTGACTGGGAAAAC
TATTCTCATAGATGTAGGTGGTAAGGCAGAATCTGATAAGAAAATCGAGGCTTGGCAAGAAAAGTCGACGACCAGCAATG
CCCAGCGTACCTTGATTCCCTATCTAAAAAGTCGAGGAGTAGACAAGATTGACCAGCTGATTTTGACCAATACAGACAAG
GAGCATGTTGGCGATTTGCTGGAGGTGACCAAGGCTTTCCATGTGGGGGAGATTTTAGTATCAAAAGGAAGTCTGACACA
GAAGGAATTTGTAGCGGAACTAGAAGCAAGTCAAAACAAGGTACGTAGTGTGACAGCTGGGGAGTATTTCCCGATTTTTG
GCAGTTACTTAGAAGTTCTATCTCCAAGGCAGATTCGAGATGGGAATCGTGATGATTCTCTGGTTCTTTATGGAAAACTT
TTGGATAAGCACTTTTTCTTTACTGGAAATTTGAAAGAGAAGGGAGAGAAGGACTTGATGAAGCATTATCCTGACCTAGA
GGTGGATGTCTTGAAAGCAGGCCAACATGGTGCTAAAACCTCATCAAATCCAGTTTTCCTAGAACAGCTCAAACCAGCGA
TTACTCTCATTTCAGTCGGAAAGAGCAATCGTACGAAACTCCCCCATCAGGAAACCTTGACACGAATGGAAAGTATCAAG
AGTAAGATTTACCGAACTGACCAGCAAGGGGCTATCCGCTTTAAAGGATGGAATAGTTGGAGAATTGAAACGGTTCGATA
A

Domains

Predicted by InterproScan.

• Competence protein (Competence) (216-458)

• Metallo-beta-lactamase superfamily (Lactamase_B) (492-636)

• Domain of unknown function (DUF4131) (DUF4131) (29-177)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis SK321	86.863	100	0.869
comEC/celB	Streptococcus mitis NCTC 12261	86.309	99.866	0.862
comEC/celB	Streptococcus pneumoniae TIGR4	85.389	100	0.854
comEC/celB	Streptococcus pneumoniae D39	85.121	100	0.851
comEC/celB	Streptococcus pneumoniae Rx1	85.121	100	0.851
comEC/celB	Streptococcus pneumoniae R6	85.121	100	0.851
comEC	Lactococcus lactis subsp. cremoris KW2	44.669	99.33	0.444