Detailed information NTG0517467

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: I9192_RS01660
• Genome accession: NZ_CP066119
• Coordinates: 359961..361019 (+)
• Length: 352 a.a.
• NCBI ID: WP_005034346.1
• Uniprot ID: N9CZM5
• Organism: Acinetobacter bereziniae strain GD03185
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 354961..366019

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I9192_RS01645 (I9192_01645)	mraY	355202..356320 (+)	1119	WP_004825397.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
I9192_RS01650 (I9192_01650)	-	356394..357197 (+)	804	WP_005034349.1	putative RNA methyltransferase	-
I9192_RS01655 (I9192_01655)	ponA	357257..359797 (-)	2541	WP_005034348.1	penicillin-binding protein PBP1a	-
I9192_RS01660 (I9192_01660)	comM	359961..361019 (+)	1059	WP_005034346.1	pilus assembly protein PilM	Machinery gene
I9192_RS01665 (I9192_01665)	pilN	361019..361660 (+)	642	WP_004825390.1	PilN domain-containing protein	Machinery gene
I9192_RS01670 (I9192_01670)	comO	361657..362409 (+)	753	WP_004825387.1	type 4a pilus biogenesis protein PilO	Machinery gene
I9192_RS01675 (I9192_01675)	comL	362406..362936 (+)	531	WP_005034344.1	pilus assembly protein PilP	Machinery gene
I9192_RS01680 (I9192_01680)	pilQ	362957..365128 (+)	2172	WP_005034341.1	type IV pilus secretin PilQ	Machinery gene
I9192_RS01685 (I9192_01685)	aroK	365165..365707 (+)	543	WP_004825383.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39076.76 Da
• Isoelectric Point: 4.5448

>NTDB_id=517467 I9192_RS01660 WP_005034346.1 359961..361019(+) (comM) [Acinetobacter bereziniae strain GD03185]
MLRLYRKQNKGLVGVDISSTTVKILELSVKNGRYWVESYGLSPLIDGSVVEKNILNPEAVADALERAVNLANPQSQNVAV
AVPTSMVIHKIIEMDADMSDEEREVQIRMDAEQYIPFPLDEVSLDFEVLNDKLANPNRVNVLLVATRAENIESRVEVLEI
AGLSPKIADVESYAIERAFDVFSDTLPIGVNLVGILDIGHTMTTLSVMQKGKIIYTREQVFGGKQLTQDVQNRYGLSYEE
AGRAKKDRTLPDDFETEVLMPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTVANPFL
QMGFSPQIDLRKIENDAPSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=517467 I9192_RS01660 WP_005034346.1 359961..361019(+) (comM) [Acinetobacter bereziniae strain GD03185]
GTGCTTAGACTATATCGTAAGCAAAATAAGGGGTTGGTAGGAGTAGATATTAGTTCTACTACTGTAAAAATTTTAGAGCT
CTCTGTTAAGAACGGTCGTTACTGGGTTGAAAGTTATGGATTAAGTCCGCTGATTGATGGGAGTGTGGTTGAAAAAAACA
TTCTCAATCCAGAAGCAGTTGCAGATGCATTAGAGCGAGCAGTCAATCTTGCTAACCCTCAATCGCAAAATGTGGCTGTT
GCTGTACCTACTTCTATGGTGATTCATAAAATCATAGAAATGGATGCAGATATGTCCGATGAGGAAAGAGAAGTTCAGAT
TCGAATGGATGCTGAACAATATATTCCTTTTCCTTTGGATGAAGTGAGCTTAGATTTTGAAGTATTGAATGATAAGTTAG
CCAATCCGAATCGAGTGAATGTACTTTTGGTGGCGACACGTGCTGAAAATATTGAGTCTCGTGTTGAAGTTCTGGAAATT
GCAGGCTTATCTCCTAAAATTGCAGATGTAGAAAGCTATGCCATAGAACGTGCATTCGATGTCTTTTCAGATACTTTACC
CATCGGGGTGAATCTTGTTGGGATCTTAGATATTGGTCACACCATGACCACATTGTCTGTGATGCAAAAAGGTAAGATTA
TTTACACGCGTGAGCAGGTGTTTGGGGGCAAACAACTGACACAAGATGTGCAAAATCGTTATGGTTTATCTTATGAGGAA
GCAGGTCGTGCCAAGAAAGACCGCACCTTACCCGATGATTTTGAAACTGAAGTGTTAATGCCGTTTTTAGAAGCGGTGGT
TCAGCAAGCAGCGCGTTCATTGCAATTCTTCTTCTCCTCCTCACAATTTAATGAGATTGATCATATTTTGCTGGCAGGTG
GAAATGCAAATATCCCAGGTTTGGCAAAATTATTACAACAAAAATTAGGCTATCGAGTCACTGTTGCAAATCCATTTTTA
CAAATGGGTTTTTCACCGCAAATTGACTTAAGAAAAATAGAAAATGATGCACCATCACTTATGGTTGCATGTGGCTTAGC
GTTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9CZM5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.659	100	0.847
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	43.38	100	0.437