Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicR   Type   Regulator
Locus tag   I6H73_RS02525 Genome accession   NZ_CP066073
Coordinates   491579..492286 (+) Length   235 a.a.
NCBI ID   WP_003055001.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1016     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 486579..497286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H73_RS02500 (I6H73_02500) - 487293..488717 (+) 1425 WP_003053986.1 glycoside hydrolase family 1 protein -
  I6H73_RS02505 (I6H73_02505) - 488816..489631 (-) 816 WP_003053982.1 TIGR03943 family protein -
  I6H73_RS02510 (I6H73_02510) - 489631..490533 (-) 903 WP_012766694.1 permease -
  I6H73_RS02515 (I6H73_02515) - 490680..490835 (-) 156 WP_012766695.1 SPJ_0845 family protein -
  I6H73_RS02520 (I6H73_02520) - 491010..491492 (+) 483 WP_003055012.1 cupin domain-containing protein -
  I6H73_RS02525 (I6H73_02525) vicR 491579..492286 (+) 708 WP_003055001.1 response regulator transcription factor Regulator
  I6H73_RS02530 (I6H73_02530) - 492287..493615 (+) 1329 WP_003055014.1 ATP-binding protein -
  I6H73_RS02535 (I6H73_02535) - 493782..494657 (+) 876 WP_003055008.1 substrate-binding domain-containing protein -
  I6H73_RS02540 (I6H73_02540) pstC 494775..495638 (+) 864 WP_003055004.1 phosphate ABC transporter permease subunit PstC -
  I6H73_RS02545 (I6H73_02545) pstA 495631..496446 (+) 816 WP_003055017.1 phosphate ABC transporter permease PstA -
  I6H73_RS02550 (I6H73_02550) pstB 496448..497200 (+) 753 WP_003055005.1 phosphate ABC transporter ATP-binding protein PstB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 27491.70 Da        Isoelectric Point: 5.4461

>NTDB_id=517174 I6H73_RS02525 WP_003055001.1 491579..492286(+) (vicR) [Streptococcus dysgalactiae strain FDAARGOS_1016]
MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLDGIEVCKRLRAKGIKTPIMMV
SAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRRTSKEQQEDDTDDFRDDYRVFGALTVYPDRHEVYKADHLLS
LTPKEFELLLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKEL

Nucleotide


Download         Length: 708 bp        

>NTDB_id=517174 I6H73_RS02525 WP_003055001.1 491579..492286(+) (vicR) [Streptococcus dysgalactiae strain FDAARGOS_1016]
ATGACAAAACAAATCTTATTAGTGGATGATGAAGAACACATTTTGAGGCTACTGGATTATCATCTCGGTAAAGAAGGGTT
TTCCACACAATTGGTAACAGATGGCCGAAAAGCATTGACATTGGCAGAAACAGAGCCTTTTGACTTTATCCTACTGGATA
TTATGTTGCCTCAGTTAGACGGCATAGAAGTGTGTAAGCGACTGAGAGCTAAAGGAATAAAAACTCCGATTATGATGGTT
TCTGCTAAAAGTGATGAATTTGATAAGGTTTTGGCCTTGGAATTAGGAGCTGATGACTACCTGACTAAGCCTTTTAGCCC
TAGAGAATTGCTGGCGCGTGTCAAGGCTATTTTACGTCGAACCAGTAAAGAGCAGCAAGAAGATGACACAGATGATTTCA
GGGATGATTATCGGGTATTTGGGGCCCTGACCGTCTATCCAGACCGGCATGAGGTTTATAAGGCAGATCATTTATTGAGC
CTTACCCCAAAGGAATTTGAACTCTTGCTCTATCTTATGAAACATCCCAACATGACATTAACTAGGGAACGTTTACTTGA
ACGGATTTGGGGATATGATTTTGGACAAGAAACCCGTTTAGTGGATGTTCATATTGGCAAATTGAGAGATAAGATAGAGG
ATAATCCTAAAGACCCTCAATTTATTCAAACGATTAGAGGCTATGGGTATAAGTTTAAGGAGTTATAG

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(159-232)

Response regulator receiver domain (Response_reg)

(5-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicR Streptococcus mutans UA159

49.145

99.574

0.489
  micA Streptococcus pneumoniae Cp1015

47.619

98.298

0.468
  covR Lactococcus lactis subsp. lactis strain DGCC12653

41.772

100

0.421
  covR Streptococcus salivarius strain HSISS4

40.506

100

0.409