Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   I6H74_RS10690 Genome accession   NZ_CP066069
Coordinates   2150017..2151519 (-) Length   500 a.a.
NCBI ID   WP_003057826.1    Uniprot ID   A0AAE9U2R6
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2145017..2156519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS10675 (I6H74_10670) amiF 2147096..2148019 (-) 924 WP_003057816.1 ABC transporter ATP-binding protein Regulator
  I6H74_RS10680 (I6H74_10675) amiE 2148012..2149082 (-) 1071 WP_003060269.1 ABC transporter ATP-binding protein Regulator
  I6H74_RS10685 (I6H74_10680) amiD 2149091..2150017 (-) 927 WP_003049687.1 oligopeptide ABC transporter permease OppC Regulator
  I6H74_RS10690 (I6H74_10685) amiC 2150017..2151519 (-) 1503 WP_003057826.1 ABC transporter permease Regulator
  I6H74_RS10695 (I6H74_10690) amiA 2151585..2153555 (-) 1971 WP_115256752.1 peptide ABC transporter substrate-binding protein Regulator
  I6H74_RS10700 (I6H74_10695) pbp3 2153886..2155124 (+) 1239 WP_046177393.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  I6H74_RS10705 (I6H74_10700) - 2155268..2156449 (+) 1182 WP_046177394.1 serine hydrolase -

Sequence

Protein


Download         Length: 500 a.a.        Molecular weight: 55942.32 Da        Isoelectric Point: 10.2619

>NTDB_id=517129 I6H74_RS10690 WP_003057826.1 2150017..2151519(-) (amiC) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MKKYILNRILRSLVSVVLVTALTYTIVYTLVPVGLIFKQDPNYNKMTTTPDKKAAYESLTFQRMGYINYFSSKELKDNAS
KIDSSVTTEATSANKVIYEKYIHSLGNGWQLKRFPVSKKFYATRKIPIYERVWNFFSNLVVIDHPWKIQDKNNPNLARYV
RLENDKSIGWSLVGSGTQHKYLVYANGKFPYLHQNLVTLNLGTSYPTYSNIPVLQVISQGQGRTALQDVTFPSGVTKKSS
VDIYSRTYKNPKSMDDITKANYGKGDSYTKTINNYVDPSMIHNSFVIGFFGVLIAYVIGLPLGLFMARFKNTYFDRFSTA
TMTFMLALPSIAVIYVVRFLGSMVGLPDSFPMLGASSPKSYVLPALILGILSIPSTVIWFRRYLVDLQASDWVRFARSKG
LSESEIYRDHLFKNAMVPIVSGIPASIILAIGGATLTETVFAFPGMGKMLIDSIKSANNSMIVGLTFIFTVLSIVSLLLG
DIAMTIVDPRIKLSTKKGGK

Nucleotide


Download         Length: 1503 bp        

>NTDB_id=517129 I6H74_RS10690 WP_003057826.1 2150017..2151519(-) (amiC) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGAAAAAATACATTTTAAACCGTATCTTACGATCGTTAGTATCGGTTGTTCTGGTAACGGCTTTAACATACACCATCGT
ATATACCCTCGTCCCTGTCGGTCTTATCTTTAAACAAGACCCTAACTACAATAAGATGACGACGACACCAGATAAAAAGG
CTGCTTATGAAAGCTTAACCTTCCAACGTATGGGGTATATTAATTACTTTTCAAGTAAAGAATTAAAAGATAATGCTTCT
AAAATAGATAGTAGTGTAACGACTGAAGCGACTAGTGCTAACAAGGTTATTTATGAGAAATATATTCATTCCCTCGGTAA
TGGCTGGCAGCTAAAACGTTTCCCGGTTAGCAAAAAATTCTATGCTACTCGTAAGATTCCTATTTACGAACGTGTTTGGA
ACTTCTTTTCAAACTTAGTTGTTATTGACCATCCTTGGAAAATTCAAGACAAGAATAACCCTAATTTAGCTAGATATGTT
CGCCTTGAAAATGATAAATCTATTGGCTGGTCACTTGTTGGATCGGGGACACAACACAAATACCTTGTTTATGCCAATGG
CAAGTTCCCTTACCTTCACCAAAACCTTGTTACCCTAAACTTAGGAACATCTTATCCAACATACAGCAATATTCCTGTTC
TTCAGGTTATTTCACAAGGACAAGGACGAACAGCTCTTCAAGATGTTACTTTCCCATCAGGAGTGACTAAAAAATCATCA
GTGGATATTTACAGTCGTACTTATAAAAATCCAAAATCAATGGATGATATTACCAAAGCAAACTATGGTAAGGGCGATTC
ATATACTAAGACCATTAATAACTATGTTGACCCATCAATGATTCACAATTCCTTTGTTATTGGGTTCTTTGGTGTCCTAA
TTGCTTATGTTATTGGACTACCTCTCGGTCTATTTATGGCACGCTTTAAAAATACCTATTTTGATCGTTTTTCAACAGCA
ACCATGACCTTCATGCTTGCCTTACCAAGTATTGCCGTTATCTATGTTGTTCGCTTCCTAGGAAGTATGGTTGGCTTGCC
AGATAGTTTTCCTATGCTAGGAGCGTCTAGCCCTAAATCTTACGTATTGCCAGCTCTTATTTTGGGAATTTTAAGTATCC
CAAGTACAGTTATCTGGTTCCGTCGCTATCTTGTTGACCTTCAGGCTAGTGATTGGGTACGGTTTGCTCGCTCAAAAGGG
TTATCAGAATCTGAAATTTATAGAGACCACCTTTTCAAAAATGCTATGGTTCCGATTGTCTCAGGTATTCCGGCAAGTAT
TATTCTTGCGATTGGTGGAGCGACATTAACAGAGACGGTTTTTGCCTTCCCAGGTATGGGGAAAATGTTGATTGATTCTA
TCAAATCAGCTAACAACTCAATGATTGTTGGGTTAACCTTTATTTTCACTGTCTTGTCAATTGTATCTCTACTGTTAGGA
GATATTGCTATGACAATTGTCGATCCACGTATTAAATTGTCAACTAAAAAAGGAGGTAAGTAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(299-492)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

60

100

0.6
  amiC Streptococcus thermophilus LMD-9

59.8

100

0.598
  amiC Streptococcus thermophilus LMG 18311

59.8

100

0.598