Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   I6H74_RS10680 Genome accession   NZ_CP066069
Coordinates   2148012..2149082 (-) Length   356 a.a.
NCBI ID   WP_003060269.1    Uniprot ID   A0A9X9SP86
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2143012..2154082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS10675 (I6H74_10670) amiF 2147096..2148019 (-) 924 WP_003057816.1 ABC transporter ATP-binding protein Regulator
  I6H74_RS10680 (I6H74_10675) amiE 2148012..2149082 (-) 1071 WP_003060269.1 ABC transporter ATP-binding protein Regulator
  I6H74_RS10685 (I6H74_10680) amiD 2149091..2150017 (-) 927 WP_003049687.1 oligopeptide ABC transporter permease OppC Regulator
  I6H74_RS10690 (I6H74_10685) amiC 2150017..2151519 (-) 1503 WP_003057826.1 ABC transporter permease Regulator
  I6H74_RS10695 (I6H74_10690) amiA 2151585..2153555 (-) 1971 WP_115256752.1 peptide ABC transporter substrate-binding protein Regulator

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 39593.59 Da        Isoelectric Point: 5.6648

>NTDB_id=517127 I6H74_RS10680 WP_003060269.1 2148012..2149082(-) (amiE) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQEL
TELKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSHSKAKELALDYMNKVGIPNATKRFDDYPFEY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIELLKSLQKEYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLANESGELYSIPGTPPSLYSPIVGDAFALRSEYAMVLDFEETPPAISVSDTHWAK
TWLLHPEAPKVQKPAVIQDLHQKILKKMSRQEEGNV

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=517127 I6H74_RS10680 WP_003060269.1 2148012..2149082(-) (amiE) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTGGAATTCGACGTGCGCGACCGTGTTTTAACGGC
TATTCGGAACGTTTCTTTAGAGCTTGTTGAAGGAGAGGTCCTTGCTTTTGTAGGAGAATCAGGTTCAGGTAAATCTGTTT
TAACCAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGTATTGCCAACGGCTCGATTGTCTACCGTGGTCAAGAATTA
ACAGAACTAAAAACGAATAAGGAATGGGCTAAGATTCGTGGTTCAAAAATTGCTACTATTTTCCAAGATCCAATGACCAG
TCTTAGTCCTATCAAAACCATTGGTAGCCAGATTACAGAGGTCATTATCAAGCATCAAAAAGTTAGCCATTCTAAAGCCA
AAGAATTGGCGCTTGATTATATGAATAAAGTTGGTATTCCAAATGCGACAAAGCGTTTTGATGACTATCCATTTGAATAT
TCAGGTGGTATGCGCCAACGTATTGTTATTGCCATTGCGTTAGCTTGCCGCCCAGATATCCTGATTTGTGATGAGCCCAC
AACAGCTCTCGACGTTACAATACAAGCCCAAATTATTGAATTGTTGAAATCACTTCAAAAAGAGTACCATTTTACGATTA
TTTTTATCACTCATGATTTAGGTGTTGTGGCAAGTATTGCTGACAAGGTTGCTGTCATGTATGCTGGTGAAATTGTCGAG
TTTGGAACTGTTGAAGAAATTTTCTATGATCCACGTCATCCTTACACATGGAGTTTATTGTCAAGCTTACCGCAATTAGC
CAATGAGTCAGGAGAACTTTACTCAATTCCAGGGACACCACCGTCACTTTATTCGCCAATCGTTGGAGATGCATTTGCGC
TTCGCTCAGAATATGCTATGGTTTTGGATTTCGAAGAGACACCACCTGCTATTAGTGTGTCTGATACTCATTGGGCAAAA
ACATGGCTTTTGCACCCAGAGGCGCCAAAAGTTCAGAAACCGGCAGTTATTCAAGATTTACATCAAAAAATCTTGAAAAA
AATGTCACGACAGGAGGAAGGAAATGTCTGA

Domains

Predicted by InterproScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(239-299)

ABC transporter (ABC_tran)

(29-187)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

77.778

100

0.787
  amiE Streptococcus thermophilus LMG 18311

76.667

100

0.775
  amiE Streptococcus thermophilus LMD-9

76.667

100

0.775
  oppD Streptococcus mutans UA159

57.27

94.663

0.542