Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6H78_RS03835 Genome accession   NZ_CP066059
Coordinates   810963..812924 (-) Length   653 a.a.
NCBI ID   WP_198460134.1    Uniprot ID   A0A7T4M197
Organism   Streptococcus oralis strain FDAARGOS_1021     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 805963..817924
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H78_RS03815 (I6H78_03815) - 807199..807882 (-) 684 WP_049489809.1 tyrosine-protein kinase -
  I6H78_RS03820 (I6H78_03820) cpsC 807892..808584 (-) 693 WP_000664126.1 capsular polysaccharide biosynthesis protein CpsC -
  I6H78_RS03825 (I6H78_03825) cps4B 808593..809324 (-) 732 WP_198460132.1 capsular polysaccharide biosynthesis protein Cps4B -
  I6H78_RS03830 (I6H78_03830) - 809326..810771 (-) 1446 WP_198460133.1 LCP family protein -
  I6H78_RS03835 (I6H78_03835) amiA3 810963..812924 (-) 1962 WP_198460134.1 peptide ABC transporter substrate-binding protein Regulator
  I6H78_RS03840 (I6H78_03840) amiA 813071..815038 (-) 1968 WP_198460135.1 peptide ABC transporter substrate-binding protein Regulator
  I6H78_RS03845 (I6H78_03845) - 815325..815837 (-) 513 WP_198460136.1 GNAT family N-acetyltransferase -
  I6H78_RS03850 (I6H78_03850) - 815889..816053 (-) 165 WP_193750114.1 hypothetical protein -
  I6H78_RS03855 (I6H78_03855) - 816102..817067 (-) 966 Protein_768 hypothetical protein -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 73026.30 Da        Isoelectric Point: 4.7907

>NTDB_id=516944 I6H78_RS03835 WP_198460134.1 810963..812924(-) (amiA3) [Streptococcus oralis strain FDAARGOS_1021]
MIKMKKRLIGTGLVLATGILLSACGQSNTDTSTYSSTFSANPTTFNYLLDYYADNTAVITNLVDGLLENDSYGNLVPALA
EDWSVSSDGLTYTYKLRKDAKWYTADGEEYASVKAQDFVTGIKYAADNKGQAMDLIQNSIKGLNDYVTGVTNDFSTVGVK
ALDDYTVEYTLTRPEPYWNSKTTNSILFPVNEEFLKSKDKDFGTLTPDSILYNGPYLLKDFTSKSSIEYVKNPHYYDHDK
VTIEKVKLAYFDGSDQEMTIRNFESGAYSIAGVYPNSSNYAKTKEKYQDNIVYSLQDKTSWYFNFNVNRKTYNHTAKTTD
EQKKSAQTAILNKNFRQAINFGIDRTAYSAQSNGEEAASKTLRNTLVPPTFVQVGDKTFGEVTASKLVNYGTEWSGINLA
DAQDAYFNKEKAQAKFAEAKKELEAQGVTFPIYLDVPVDQTNKNAVSGMNSVKQTLETVLGSDNIVIDVQQLSTDDFGNV
AFLAPNPAARDYDLNFDGWVGDYQDPSTYLDPFNAETGFYLKIFGLDAKEDQELVKSLGLDTYTQLLKEADAENKDVAKR
YEKYAEAQAWMIDNSLVMSAMSNGGTASVTKVTPFTRAYSLVGIKGDGNNYKYMRLQKDPVTKKQFDEAKAKWEAESKKA
IEKSQKEFENHVK

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=516944 I6H78_RS03835 WP_198460134.1 810963..812924(-) (amiA3) [Streptococcus oralis strain FDAARGOS_1021]
ATGATCAAAATGAAAAAAAGACTAATCGGGACAGGTCTTGTCTTAGCGACAGGGATTTTGCTCTCTGCATGTGGACAGTC
CAACACAGATACTAGCACTTATTCATCAACATTTAGTGCAAATCCAACAACTTTTAACTATCTTCTAGATTATTATGCAG
ATAACACTGCTGTTATTACCAATCTTGTAGATGGTTTGTTAGAAAATGACAGCTATGGGAACCTCGTACCTGCTCTTGCG
GAGGATTGGTCTGTTTCATCAGATGGTTTGACCTATACCTACAAGCTTAGAAAAGATGCCAAGTGGTATACAGCTGACGG
TGAGGAGTATGCTTCAGTCAAAGCTCAGGATTTTGTTACTGGGATCAAATATGCCGCGGACAACAAGGGACAAGCCATGG
ATCTGATCCAAAATTCAATCAAGGGATTGAATGACTATGTGACGGGTGTGACTAATGATTTTTCAACTGTTGGTGTCAAA
GCCTTGGATGATTACACAGTAGAGTACACTTTAACTCGACCAGAACCGTACTGGAATTCAAAGACAACCAACAGTATCCT
TTTCCCAGTCAACGAAGAGTTCTTGAAATCAAAGGATAAAGATTTTGGTACCTTGACACCAGACAGTATTCTTTATAACG
GTCCCTATTTGTTAAAAGATTTCACATCAAAATCTTCGATCGAATATGTGAAGAATCCACACTATTATGACCATGATAAA
GTAACCATTGAAAAAGTGAAGTTAGCCTACTTTGATGGGTCAGATCAGGAAATGACCATTCGAAACTTTGAAAGTGGTGC
TTACTCTATTGCAGGAGTCTATCCAAATAGTTCGAACTATGCTAAGACAAAAGAAAAATACCAAGACAATATCGTCTATA
GCTTACAAGACAAGACATCTTGGTACTTTAACTTTAATGTCAACCGCAAAACCTATAATCATACCGCTAAAACAACGGAC
GAACAAAAGAAATCAGCTCAAACAGCTATCTTAAATAAAAATTTCCGTCAGGCTATCAACTTTGGAATTGATCGAACAGC
CTACTCTGCTCAATCTAACGGTGAAGAAGCAGCGAGCAAAACCCTTCGTAATACTCTGGTTCCCCCAACATTTGTCCAGG
TGGGAGATAAGACCTTTGGAGAAGTAACAGCTTCTAAGCTTGTGAACTACGGAACTGAGTGGTCAGGCATCAATTTGGCA
GACGCTCAAGATGCTTACTTTAACAAGGAAAAGGCCCAAGCAAAATTTGCGGAAGCTAAAAAGGAATTGGAAGCCCAAGG
CGTGACTTTCCCAATCTATTTGGATGTCCCTGTTGATCAGACAAATAAAAATGCGGTTTCTGGTATGAACTCGGTTAAAC
AAACCCTTGAAACAGTACTAGGTTCTGACAATATCGTCATTGATGTTCAACAGCTTTCTACAGATGACTTTGGAAATGTT
GCCTTCCTAGCACCAAATCCAGCAGCTCGTGACTACGACCTAAACTTTGATGGCTGGGTTGGTGATTACCAGGATCCATC
AACTTATCTAGACCCCTTCAATGCTGAAACTGGCTTCTATCTCAAGATTTTTGGTCTTGACGCCAAGGAAGACCAAGAGC
TCGTTAAGAGTCTGGGACTCGATACCTATACGCAACTCCTGAAAGAAGCAGATGCTGAGAACAAAGATGTCGCTAAGCGT
TATGAAAAATACGCTGAAGCTCAAGCTTGGATGATTGACAATTCTCTAGTCATGTCTGCTATGTCAAATGGTGGTACAGC
CTCTGTAACCAAAGTAACTCCCTTTACACGTGCCTACTCCCTAGTAGGGATCAAGGGTGACGGAAATAATTATAAGTACA
TGAGATTGCAAAAAGACCCTGTTACCAAGAAACAATTTGACGAGGCCAAGGCTAAGTGGGAAGCAGAAAGTAAAAAGGCT
ATTGAAAAGAGCCAAAAAGAGTTTGAAAACCACGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T4M197

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

51.294

100

0.516
  amiA3 Streptococcus thermophilus LMG 18311

51.142

100

0.515
  amiA Streptococcus salivarius strain HSISS4

50.457

100

0.507