Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   I6H72_RS00755 Genome accession   NZ_CP066055
Coordinates   142547..143551 (+) Length   334 a.a.
NCBI ID   WP_006270669.1    Uniprot ID   A0AAD2Y396
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 137547..148551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS00735 (I6H72_00735) rfbB 137746..138792 (+) 1047 WP_198458091.1 dTDP-glucose 4,6-dehydratase -
  I6H72_RS00740 (I6H72_00740) galE 138827..139846 (+) 1020 WP_048801009.1 UDP-glucose 4-epimerase GalE -
  I6H72_RS00745 (I6H72_00745) - 140104..140685 (+) 582 WP_198458092.1 class I SAM-dependent methyltransferase -
  I6H72_RS00750 (I6H72_00750) - 141200..142282 (-) 1083 WP_198458093.1 M24 family metallopeptidase -
  I6H72_RS00755 (I6H72_00755) ccpA 142547..143551 (+) 1005 WP_006270669.1 catabolite control protein A Regulator
  I6H72_RS00760 (I6H72_00760) - 143643..144641 (+) 999 WP_020997876.1 glycosyltransferase family 4 protein -
  I6H72_RS00765 (I6H72_00765) - 144643..145956 (+) 1314 WP_006268747.1 glycosyltransferase family 4 protein -
  I6H72_RS00770 (I6H72_00770) - 146010..146315 (+) 306 WP_198458408.1 hypothetical protein -
  I6H72_RS00775 (I6H72_00775) micA 146616..147317 (+) 702 WP_003035055.1 response regulator YycF Regulator

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 37114.26 Da        Isoelectric Point: 5.8327

>NTDB_id=516826 I6H72_RS00755 WP_006270669.1 142547..143551(+) (ccpA) [Streptococcus constellatus strain FDAARGOS_1015]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATMDAVERLTKNNKKIAFVSGPLVDDINGKIRLIGYKEALKKAKLSYSEGLVFESKYSYEDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKDVNIPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=516826 I6H72_RS00755 WP_006270669.1 142547..143551(+) (ccpA) [Streptococcus constellatus strain FDAARGOS_1015]
ATGAACACAGACGATACTGTAACGATTTATGATGTCGCCCGTGAAGCGGGAGTTTCAATGGCGACCGTTAGCCGTGTCGT
AAACGGCAATAAAAATGTAAAGGAAAATACAAGAAAAAAAGTCTTGGAAGTCATTGATCGCCTTGACTATCGACCAAATG
CAGTTGCTCGTGGACTTGCCAGTAAGAAAACGACAACAGTAGGAGTTGTCATTCCAAACATTACAAGCAGTTATTTTGCA
ACGCTTGCGAAAGGAATTGATGACATCGCAGAGATGTATAAGTATAATATTGTTTTGGCAAATAGTGATGAGGATGATGA
CAAGGAAGTTTCTGTTGTCAATACCTTGTTCTCAAAACAAGTGGACGGCATTATCTTTATGGGATATCATCTAACAGAAA
AGATTCGTTCTGAGTTTTCTCGTTCAAGGACGCCGGTTGTACTTGCAGGAACGGTTGACGTGGAACATCAATTGCCAAGT
GTTAATATTGATTACAAACAAGCAACTATGGATGCAGTAGAGCGCCTCACTAAAAACAATAAAAAAATTGCTTTTGTGAG
TGGACCTTTGGTAGATGATATAAATGGTAAGATTCGTTTAATTGGTTACAAAGAAGCGTTGAAAAAAGCAAAACTTTCTT
ATAGTGAAGGGCTTGTCTTTGAGTCTAAATACAGCTATGAGGATGGCTATCAATTGGCAGAGCGTGTCATTGCTTCTAAA
GCGACAGCGGCCTTTGTGACTGGCGATGAACTGGCAGCTGGATTGTTAAATGGCTTATCAGACAAAGATGTAAATATACC
AGAAGATTTTGAAATCATTACTAGTGATGATTCGCAGGTAGCACGTTTTACTCGTCCAAATTTGACGACAATTGGACAAC
CTTTGTACGATCTTGGTGCGATTAGTATGCGCATGTTGACTAAGATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTG
GTGTTAGCTCATGGTCTTATTGAGCGCCGTTCAACAAGGAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.419

100

0.904

  ccpA Streptococcus pneumoniae D39

87.425

100

0.874

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.006

99.102

0.575