Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   KW2_RS08040 Genome accession   NC_022369
Coordinates   1703122..1704120 (-) Length   332 a.a.
NCBI ID   WP_014572279.1    Uniprot ID   -
Organism   Lactococcus cremoris subsp. cremoris KW2     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1698122..1709120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KW2_RS08020 (kw2_1611) trxA 1698380..1698694 (-) 315 WP_003129442.1 thioredoxin -
  KW2_RS08025 (kw2_1612) mutS/mutS2 1698791..1701121 (-) 2331 WP_021037597.1 endonuclease MutS2 Machinery gene
  KW2_RS08030 (kw2_1613) - 1701165..1701725 (-) 561 WP_011834758.1 CvpA family protein -
  KW2_RS08035 (kw2_1614) - 1702023..1702988 (-) 966 WP_021037598.1 NAD(P)/FAD-dependent oxidoreductase -
  KW2_RS08040 (kw2_1615) ccpA 1703122..1704120 (-) 999 WP_014572279.1 catabolite control protein A Regulator
  KW2_RS08045 (kw2_1616) - 1704334..1705422 (+) 1089 WP_011834755.1 M24 family metallopeptidase -
  KW2_RS08050 (kw2_1617) - 1705526..1707535 (-) 2010 WP_021037599.1 cell division site-positioning protein MapZ family protein -
  KW2_RS08055 (kw2_1618) - 1707717..1708871 (-) 1155 WP_021037600.1 THUMP domain-containing class I SAM-dependent RNA methyltransferase -

Sequence

Protein


Download         Length: 332 a.a.        Molecular weight: 36612.71 Da        Isoelectric Point: 4.8398

>NTDB_id=51672 KW2_RS08040 WP_014572279.1 1703122..1704120(-) (ccpA) [Lactococcus cremoris subsp. cremoris KW2]
MVESTTTIYDVARVAGVSMATVSRVVNGNANVKEKTRQKVLEAIAELDYRPNAVARGLASKRTTTVGVILPTITSTYFAA
ITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTSLKNSRTPVVLVGTIDGDKEIPSV
NIDYHLAAYQSTTKLIENGNKKIAYIMGSLKDVENTERMVGYQEALLEANIEFDENLVFEGNYSYEQGKSLAERLLERGA
TSAVVSHDTVAVGLLSAMMDKGVKVPEEFEIISGANSPITQYTYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQNQLV
LDHEIISRRSTK

Nucleotide


Download         Length: 999 bp        

>NTDB_id=51672 KW2_RS08040 WP_014572279.1 1703122..1704120(-) (ccpA) [Lactococcus cremoris subsp. cremoris KW2]
ATGGTAGAATCAACAACAACAATTTATGATGTGGCACGTGTCGCCGGAGTCTCAATGGCAACCGTTAGTCGCGTTGTAAA
TGGAAATGCAAATGTGAAGGAAAAGACGCGCCAGAAGGTTTTAGAAGCTATTGCTGAGCTTGACTATCGTCCTAACGCTG
TGGCACGTGGACTTGCAAGTAAACGGACAACAACGGTCGGTGTTATCTTGCCAACAATCACCTCAACATACTTCGCAGCT
ATTACTCGCGGAGTTGATGATATCGCTTCCATGTATAAATACAACATGATTTTAGCTAATAGTGATAATGATGTTGAAAA
AGAAGAAAAAGTTTTAGAAACTTTCTTGTCAAAACAAGTAGACGGAATTGTTTACATGGGCTCATCATTAGATGAAAAAA
TTAGAACTTCCCTTAAAAATTCAAGAACACCTGTTGTTTTAGTAGGAACAATTGATGGGGATAAAGAAATTCCATCAGTT
AATATTGATTACCATTTGGCTGCTTACCAATCAACAACTAAATTAATCGAAAATGGAAATAAGAAAATTGCTTACATCAT
GGGTTCATTGAAAGATGTTGAAAACACTGAACGTATGGTTGGTTATCAAGAAGCTTTACTTGAAGCAAATATTGAATTTG
ATGAAAATCTTGTTTTTGAAGGTAATTATAGCTACGAACAAGGCAAATCACTTGCTGAACGCTTACTTGAAAGAGGAGCA
ACCTCTGCAGTTGTTTCACATGATACGGTAGCCGTTGGCCTCTTGTCTGCGATGATGGATAAAGGAGTTAAAGTTCCTGA
AGAATTTGAAATCATTTCTGGTGCAAACTCACCAATTACTCAATATACTTATCCAACATTAACTTCTGTTAATCAACCGC
TTTATGATTTAGGGGCTGTAGCAATGCGTCTTTTGACAAAATTAATGCTTAAAGAAGATGTTGAGCAAAACCAATTAGTT
TTGGACCATGAAATCATTTCTCGTCGCTCAACTAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(7-52)

Periplasmic binding protein-like domain (Peripla_BP_3)

(174-331)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

98.193

100

0.982
  ccpA Streptococcus gordonii str. Challis substr. CH1

57.1

99.699

0.569
  ccpA Streptococcus pneumoniae D39

56.798

99.699

0.566

Multiple sequence alignment