Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6I32_RS03780 Genome accession   NZ_CP066041
Coordinates   790737..792698 (-) Length   653 a.a.
NCBI ID   WP_198464961.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 785737..797698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS03760 (I6I32_03760) - 786964..787656 (-) 693 WP_061588742.1 tyrosine-protein kinase -
  I6I32_RS03765 (I6I32_03765) cpsC 787666..788358 (-) 693 WP_049504884.1 capsular polysaccharide biosynthesis protein CpsC -
  I6I32_RS03770 (I6I32_03770) cps4B 788367..789098 (-) 732 WP_049520843.1 capsular polysaccharide biosynthesis protein Cps4B -
  I6I32_RS03775 (I6I32_03775) - 789100..790545 (-) 1446 WP_000091222.1 LCP family protein -
  I6I32_RS03780 (I6I32_03780) amiA3 790737..792698 (-) 1962 WP_198464961.1 peptide ABC transporter substrate-binding protein Regulator
  I6I32_RS03785 (I6I32_03785) amiA 792845..794812 (-) 1968 WP_000837394.1 peptide ABC transporter substrate-binding protein Regulator
  I6I32_RS03790 (I6I32_03790) - 795099..795611 (-) 513 WP_000624246.1 GNAT family N-acetyltransferase -
  I6I32_RS03795 (I6I32_03795) - 795753..795911 (+) 159 Protein_752 site-specific integrase -
  I6I32_RS03800 (I6I32_03800) - 796212..797159 (-) 948 WP_057489227.1 AEC family transporter -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 73113.42 Da        Isoelectric Point: 4.7639

>NTDB_id=516635 I6I32_RS03780 WP_198464961.1 790737..792698(-) (amiA3) [Streptococcus oralis strain FDAARGOS_1075]
MIEMKKRLIGTGLVLATGILLSACGQSNTDTSTYSSTFSANPTTFNYLLDYYADNTAVITNLVDGLLENDSYGNLVPALA
EDWSVSSDGLTYTYKLRKDAKWYTADGEEYASVKAQDFVTGIKYAADNKGQAMDLIQNSIKGLNDYVTGVTNDFSTVGVK
ALDDYTVEYTLTRPEPYWNSKTTNSILFPVNEEFLKSKDKDFGTLTPDSILYNGPYLLKDFTSKSSIEYVKNPHYYDHDK
VTIEKVKLAYFDGSDQEMTIRNFESGAYSIVGVYPNSSNYAKTKEKYQDNIVYSLQDKTSWYFNFNVNRKTYNHTAKTTD
EQKKSAQTAILNKNFRQAINFGIDRTAYSAQSNGEEAASKTLRNTLVPPTFVQVGDKTFGEVTASKLVNYGTEWSGINLA
DAQDAYFNKEKAQAKFAEAKKELEAQGVTFPIHLDVPVDQTNKNAVSGMNSVKQTLETVLGSDNIVIDVQQLSTDDFGNV
AFLAPNPAARDYDLNFDGWVGDYQDPSTYLDPFNAETGFYLKIFGLDAKEDQELIKSLGLDIYTKLLKEADAENKDVAKR
YEKYAEAQAWMIDNSLVMSAMSNGGTASVTKVTPFTRAYSLVGIKGDGNNYKYMRLQKDPVTKKQFDEAKAKWEEESKKA
IEKSQKEFENHVK

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=516635 I6I32_RS03780 WP_198464961.1 790737..792698(-) (amiA3) [Streptococcus oralis strain FDAARGOS_1075]
ATGATCGAAATGAAAAAAAGACTGATTGGGACAGGTCTTGTCTTAGCGACCGGGATTTTGCTTTCGGCATGTGGACAGTC
CAACACAGATACTAGCACTTATTCATCAACATTTAGTGCGAATCCAACAACTTTTAACTATCTCCTAGATTATTATGCAG
ATAACACTGCCGTTATTACCAATCTTGTAGATGGTTTGTTAGAAAATGACAGCTATGGGAACCTCGTACCTGCTCTTGCG
GAGGATTGGTCTGTTTCATCAGATGGTTTGACCTATACCTACAAGCTTAGAAAAGATGCCAAGTGGTATACGGCTGATGG
TGAGGAATACGCTTCAGTCAAAGCTCAGGATTTTGTCACTGGGATCAAATATGCCGCGGACAATAAGGGGCAAGCCATGG
ATCTGATCCAAAATTCAATCAAGGGATTGAATGACTATGTGACGGGTGTGACCAATGACTTTTCAACTGTCGGTGTCAAA
GCCTTGGATGATTACACAGTCGAGTACACTTTGACTCGACCAGAACCGTATTGGAATTCAAAGACAACCAATAGTATTCT
TTTCCCAGTCAACGAAGAGTTCTTGAAATCAAAGGATAAAGATTTTGGTACCTTGACACCAGACAGTATCCTTTATAACG
GTCCCTATCTGTTAAAAGATTTCACATCAAAATCTTCGATCGAATATGTGAAGAATCCACACTATTATGACCATGATAAA
GTAACCATTGAAAAAGTTAAGTTAGCTTACTTTGATGGGTCAGATCAGGAGATGACCATTCGAAACTTTGAAAGTGGTGC
TTACTCGATTGTAGGAGTCTATCCAAATAGTTCGAACTATGCTAAGACAAAAGAAAAATACCAAGACAATATCGTCTATA
GTTTACAAGACAAGACTTCTTGGTACTTCAACTTTAACGTCAACCGCAAAACCTATAATCATACCGCTAAAACAACGGAT
GAACAAAAGAAATCAGCTCAAACAGCTATCTTAAATAAAAATTTCCGTCAAGCTATCAACTTTGGTATTGATCGAACAGC
CTACTCTGCTCAATCTAACGGTGAAGAAGCAGCGAGCAAAACCCTTCGTAATACTCTAGTTCCTCCAACATTTGTCCAGG
TGGGAGATAAGACCTTTGGAGAAGTAACAGCTTCTAAGCTTGTGAACTACGGAACTGAGTGGTCAGGTATCAATTTGGCA
GATGCTCAAGATGCCTACTTTAACAAGGAAAAGGCCCAAGCAAAATTTGCGGAAGCTAAAAAGGAATTGGAAGCCCAAGG
CGTGACTTTCCCAATCCATTTGGATGTCCCTGTTGATCAGACGAATAAAAATGCGGTCTCTGGTATGAACTCGGTCAAAC
AAACCCTTGAAACAGTACTAGGTTCTGACAATATCGTCATTGATGTTCAACAGCTTTCTACAGATGACTTTGGAAATGTT
GCCTTCCTAGCACCAAATCCAGCAGCTCGTGACTACGACCTAAACTTTGATGGTTGGGTTGGTGATTACCAGGATCCATC
AACTTATCTAGATCCCTTCAATGCTGAAACTGGCTTCTATCTCAAGATTTTTGGTCTTGATGCCAAGGAAGACCAAGAGC
TCATTAAGAGTTTGGGGCTCGATATCTATACGAAACTTCTAAAAGAAGCAGATGCTGAGAATAAAGATGTCGCTAAGCGT
TATGAAAAATACGCTGAAGCTCAAGCTTGGATGATTGACAATTCTCTAGTTATGTCTGCTATGTCAAATGGTGGTACAGC
CTCTGTAACCAAAGTAACTCCGTTTACACGTGCCTACTCCCTAGTGGGAATCAAGGGTGACGGAAATAATTATAAGTACA
TGAGATTACAAAAAGACCCTGTTACCAAGAAACAATTTGATGAAGCCAAGGCTAAGTGGGAAGAAGAAAGTAAAAAAGCT
ATCGAAAAGAGCCAAAAAGAGTTTGAAAACCACGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

51.692

99.541

0.515
  amiA3 Streptococcus thermophilus LMG 18311

51.538

99.541

0.513
  amiA Streptococcus salivarius strain HSISS4

51.002

99.387

0.507