Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   I6H77_RS05295 Genome accession   NZ_CP066021
Coordinates   1083027..1083650 (+) Length   207 a.a.
NCBI ID   WP_000240908.1    Uniprot ID   K1AJV1
Organism   Streptococcus oralis strain FDAARGOS_1020     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1078027..1088650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H77_RS05285 (I6H77_05285) rpoC 1078663..1082361 (+) 3699 WP_198456486.1 DNA-directed RNA polymerase subunit beta' -
  I6H77_RS05290 (I6H77_05290) ndk 1082473..1082892 (+) 420 WP_000438309.1 nucleoside-diphosphate kinase -
  I6H77_RS05295 (I6H77_05295) comM 1083027..1083650 (+) 624 WP_000240908.1 hypothetical protein Regulator
  I6H77_RS05300 (I6H77_05300) tsaE 1083734..1084177 (+) 444 WP_000556960.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I6H77_RS05305 (I6H77_05305) - 1084167..1084688 (+) 522 WP_000455521.1 GNAT family N-acetyltransferase -
  I6H77_RS05310 (I6H77_05310) brpA 1084693..1085733 (+) 1041 WP_000592174.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6H77_RS05315 (I6H77_05315) cinA 1085806..1087062 (+) 1257 WP_000642669.1 competence/damage-inducible protein A Machinery gene
  I6H77_RS05320 (I6H77_05320) recA 1087117..1088265 (+) 1149 WP_001085515.1 recombinase RecA Machinery gene
  I6H77_RS05325 (I6H77_05325) - 1088435..1088629 (+) 195 WP_000415528.1 PspC domain-containing protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23752.69 Da        Isoelectric Point: 9.2521

>NTDB_id=516479 I6H77_RS05295 WP_000240908.1 1083027..1083650(+) (comM) [Streptococcus oralis strain FDAARGOS_1020]
MVKSIRLLLLIAVIQISFSSCLLWKESFLSLKQTNAYFLILIVGISVLCAGINYFHTADQSRHSILHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATMVFLRNPLV
ISSIFFYISVGFLCARFLFPKCIQREISFYGHLIRDILFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=516479 I6H77_RS05295 WP_000240908.1 1083027..1083650(+) (comM) [Streptococcus oralis strain FDAARGOS_1020]
ATGGTAAAATCAATTCGCCTATTGTTACTGATTGCAGTCATCCAGATTAGTTTTAGTAGTTGCCTATTATGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTACTTTTTGATTTTGATAGTAGGAATTTCTGTTTTGTGCGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGACATAGTATTTTACATGTTCAAAAGAAAGTGAGCCTTGTTTATTGCCTCCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAAACCACTAGCAAATTGCAGCAGGAACTGGTTGA
CCTCTTTTTACCCTCCTTCTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATGGTTTTCTTGAGGAATCCCTTAGTG
ATTTCCTCGATTTTCTTTTATATCAGTGTTGGTTTTCTATGCGCACGTTTCCTTTTTCCCAAATGTATCCAAAGGGAAAT
CTCCTTTTATGGGCACCTGATTCGGGATATCCTGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB K1AJV1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

50.971

99.517

0.507
  comM Streptococcus pneumoniae R6

50.971

99.517

0.507
  comM Streptococcus pneumoniae TIGR4

50.971

99.517

0.507
  comM Streptococcus mitis NCTC 12261

41.117

95.169

0.391
  comM Streptococcus mitis SK321

41.117

95.169

0.391