Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6H77_RS04180 Genome accession   NZ_CP066021
Coordinates   851762..852520 (-) Length   252 a.a.
NCBI ID   WP_000410357.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1020     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 846762..857520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H77_RS04155 (I6H77_04155) pth 846787..847356 (-) 570 WP_000163918.1 aminoacyl-tRNA hydrolase -
  I6H77_RS04160 (I6H77_04160) ychF 847430..848545 (-) 1116 WP_001218695.1 redox-regulated ATPase YchF -
  I6H77_RS04165 (I6H77_04165) - 848630..848824 (-) 195 WP_000285184.1 DUF951 domain-containing protein -
  I6H77_RS04170 (I6H77_04170) dnaN 848889..850025 (-) 1137 WP_000581146.1 DNA polymerase III subunit beta -
  I6H77_RS04175 (I6H77_04175) dnaA 850184..851545 (-) 1362 WP_000660625.1 chromosomal replication initiator protein DnaA -
  I6H77_RS04180 (I6H77_04180) spo0J 851762..852520 (-) 759 WP_000410357.1 ParB/RepB/Spo0J family partition protein Regulator
  I6H77_RS04185 (I6H77_04185) htrA 852578..853774 (-) 1197 WP_000681805.1 S1C family serine protease Regulator
  I6H77_RS04190 (I6H77_04190) rlmH 853960..854439 (+) 480 WP_000694221.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6H77_RS04200 (I6H77_04200) comC/comC1 854721..854846 (+) 126 WP_002874960.1 competence-stimulating peptide ComC Regulator
  I6H77_RS04205 (I6H77_04205) comD 854867..856186 (+) 1320 WP_000054555.1 competence system sensor histidine kinase ComD Regulator
  I6H77_RS04210 (I6H77_04210) comE 856183..856935 (+) 753 WP_000866079.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29029.56 Da        Isoelectric Point: 9.2997

>NTDB_id=516466 I6H77_RS04180 WP_000410357.1 851762..852520(-) (spo0J) [Streptococcus oralis strain FDAARGOS_1020]
MEKFEMISISEIQKNPYQPRKEFDADKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEYILTEVENGKISQAHA
RSLVGLDKKQQDYFFQLIKNEDISVRKLEALLTEKKQKKQKKSDSFIKDEEDKLKKLLGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=516466 I6H77_RS04180 WP_000410357.1 851762..852520(-) (spo0J) [Streptococcus oralis strain FDAARGOS_1020]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGGAAAGAATTTGATGCAGATAA
ACTAAAGGAATTAGCTCAGTCAATCAAAGAAAATGGGCTTATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGAGCTTCTCTCTTGGCTGGTCTGACCTCTATTCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATGATCCAGTCAATCATTGAGAATTTGCAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTACGAATCTTTAGTAGAAAAAGGATTTACTCACACTGAGATAGCAGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTGCTTTCCCTACCAGAATATATCTTAACTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCACTAGTTGGTTTGGATAAGAAGCAGCAAGACTATTTCTTTCAACTAATTAAAAATGAAGACATCTCTGTGAGAAA
ACTAGAAGCACTTCTTACAGAGAAAAAACAAAAGAAGCAAAAAAAAAGTGATTCTTTCATCAAAGACGAAGAAGATAAAT
TAAAAAAACTACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(145-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508