Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6H77_RS02810 Genome accession   NZ_CP066021
Coordinates   589271..591232 (-) Length   653 a.a.
NCBI ID   WP_000571829.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1020     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 584271..596232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H77_RS02790 (I6H77_02790) - 585498..586190 (-) 693 WP_001142500.1 tyrosine-protein kinase -
  I6H77_RS02795 (I6H77_02795) cpsC 586200..586892 (-) 693 WP_000664126.1 capsular polysaccharide biosynthesis protein CpsC -
  I6H77_RS02800 (I6H77_02800) cps4B 586901..587632 (-) 732 WP_000565325.1 capsular polysaccharide biosynthesis protein Cps4B -
  I6H77_RS02805 (I6H77_02805) - 587634..589079 (-) 1446 WP_000091221.1 LCP family protein -
  I6H77_RS02810 (I6H77_02810) amiA3 589271..591232 (-) 1962 WP_000571829.1 peptide ABC transporter substrate-binding protein Regulator
  I6H77_RS02815 (I6H77_02815) amiA 591379..593346 (-) 1968 WP_000837399.1 peptide ABC transporter substrate-binding protein Regulator
  I6H77_RS02820 (I6H77_02820) - 593632..594144 (-) 513 WP_000624246.1 GNAT family N-acetyltransferase -
  I6H77_RS02825 (I6H77_02825) - 594413..595378 (-) 966 WP_025169028.1 hypothetical protein -
  I6H77_RS02830 (I6H77_02830) rpsI 595609..596001 (-) 393 WP_000075973.1 30S ribosomal protein S9 -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 73115.39 Da        Isoelectric Point: 4.7639

>NTDB_id=516443 I6H77_RS02810 WP_000571829.1 589271..591232(-) (amiA3) [Streptococcus oralis strain FDAARGOS_1020]
MIEMKKRLIGTGLVLATGILLSACGQSNTDTSTYSSTFSANPTTFNYLLDYYADNTAVITNLVDGLLENDSYGNLVPALA
EDWSVSSDGLTYTYKLRKDAKWYTADGEEYASVKAQDFVTGIKYAADNKGQAMDLIQNSIKGLNDYVTGVTNDFSTVGVK
ALDDYTVEYTLTRPEPYWNSKTTNSILFPVNEEFLKSKDKDFGTLTPDSILYNGPYLLKDFTSKSSIEYVKNPHYYDHDK
VTIEKVKLAYFDGSDQEMTIRNFESGAYSIAGVYPNSSNYAKTKEKYQDNIVYSLQDKTSWYFNFNVNRKTYNHTAKTTD
EQKKSAQTAILNKNFRQAINFGIDRTAYSAQSNGEEAASKTLRNTLVPPTFVQVGDKTFGEVTASKLVNYGTEWSGINLA
DAQDAYFNKEKAQAKFAEAKKELEAQGVTFPIHLDVPVDQTNKNAVSGMNSVKQTLETVLGSDNIVIDVQQLSTDDFGNV
AFLAPNPAARDYDLNFDGWVGDYQDPSTYLDPFNAETGFYLKIFGLDAKEDQELIKSLGLDIYTKLLKEADAENKDVTKR
YEKYAEAQAWMIDNSLVMSAMSNGGTASVTKVTPFTRAYSLVGIKGDGNNYKYMRLQKDPVTKKQFDEAKAKWEEESKKA
IEKSQKEFENHVK

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=516443 I6H77_RS02810 WP_000571829.1 589271..591232(-) (amiA3) [Streptococcus oralis strain FDAARGOS_1020]
ATGATCGAAATGAAAAAAAGACTGATTGGGACAGGTCTTGTCTTAGCGACCGGGATTTTGCTTTCGGCATGTGGACAGTC
CAACACAGATACTAGCACTTATTCATCAACATTTAGTGCGAATCCAACAACTTTTAACTATCTCCTAGATTATTATGCAG
ATAACACTGCCGTTATTACCAATCTTGTAGATGGTTTGTTAGAAAATGACAGCTATGGGAACCTCGTACCTGCTCTTGCA
GAGGATTGGTCTGTTTCATCAGATGGTTTGACCTATACCTACAAGCTTAGAAAAGATGCCAAGTGGTATACGGCTGATGG
TGAGGAATACGCTTCAGTCAAAGCTCAGGATTTTGTCACTGGGATCAAATATGCCGCGGACAATAAGGGGCAAGCCATGG
ATCTGATCCAAAATTCAATCAAGGGATTGAATGACTATGTGACGGGTGTGACCAATGACTTTTCAACTGTCGGTGTCAAA
GCCTTGGATGATTACACAGTCGAGTACACTTTGACTCGACCAGAACCGTATTGGAATTCAAAGACAACCAATAGTATTCT
TTTCCCAGTCAACGAAGAGTTCTTGAAATCAAAGGATAAAGATTTTGGTACCTTGACACCAGACAGTATCCTTTATAACG
GTCCCTATCTGTTAAAAGATTTCACATCAAAATCTTCGATCGAATATGTGAAGAATCCACACTATTATGACCATGATAAA
GTAACCATTGAAAAAGTTAAGTTAGCTTACTTTGATGGATCAGATCAGGAGATGACCATTCGAAACTTTGAAAGTGGTGC
TTACTCGATTGCAGGAGTCTATCCAAATAGTTCGAACTATGCTAAGACAAAAGAAAAATACCAAGACAATATCGTCTATA
GTTTACAAGACAAGACTTCTTGGTACTTCAACTTTAACGTCAACCGCAAAACCTATAATCATACCGCTAAAACAACGGAT
GAACAAAAGAAATCAGCTCAAACAGCTATCTTAAATAAAAATTTCCGTCAAGCTATCAACTTTGGTATTGATCGAACAGC
CTACTCTGCTCAATCTAACGGTGAAGAAGCAGCGAGCAAAACCCTTCGTAATACTCTAGTTCCTCCAACATTTGTCCAGG
TGGGAGATAAGACCTTTGGAGAAGTAACAGCTTCTAAGCTTGTGAACTACGGAACTGAGTGGTCAGGTATCAATTTGGCA
GATGCTCAAGATGCCTACTTTAACAAGGAAAAGGCCCAAGCAAAATTTGCGGAAGCTAAAAAGGAATTGGAAGCCCAAGG
CGTGACTTTCCCAATCCATTTGGATGTCCCTGTTGATCAGACGAATAAAAATGCGGTCTCTGGTATGAACTCGGTCAAAC
AAACCCTTGAAACAGTACTAGGTTCTGACAATATCGTCATTGATGTTCAACAGCTTTCTACAGATGACTTTGGAAATGTT
GCCTTCCTAGCACCAAATCCAGCAGCTCGTGACTACGACCTAAACTTTGATGGTTGGGTTGGTGATTACCAGGATCCATC
AACTTATCTAGATCCCTTCAATGCTGAAACTGGCTTCTATCTCAAGATTTTTGGTCTTGATGCCAAGGAAGACCAAGAGC
TCATTAAGAGTTTGGGGCTCGATATCTATACGAAACTTCTAAAAGAAGCAGATGCTGAGAATAAAGATGTCACTAAGCGT
TATGAAAAATACGCTGAAGCTCAAGCTTGGATGATTGACAATTCTCTAGTTATGTCTGCTATGTCAAATGGTGGTACAGC
CTCTGTAACCAAAGTAACTCCGTTTACACGTGCCTACTCCCTAGTGGGAATCAAGGGTGACGGAAATAATTATAAGTACA
TGAGATTACAAAAAGACCCTGTTACCAAGAAACAATTTGATGAAGCCAAGGCTAAGTGGGAAGAAGAAAGTAAAAAAGCT
ATCGAAAAGAGCCAAAAAGAGTTTGAAAACCACGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

51.846

99.541

0.516
  amiA3 Streptococcus thermophilus LMG 18311

51.692

99.541

0.515
  amiA Streptococcus salivarius strain HSISS4

51.156

99.387

0.508