Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   JAN99_RS06890 Genome accession   NZ_CP065927
Coordinates   1408728..1410080 (-) Length   450 a.a.
NCBI ID   WP_002985643.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm9ST603     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1403728..1415080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JAN99_RS06880 (JAN99_06875) rnc 1406780..1407472 (-) 693 WP_002990670.1 ribonuclease III -
  JAN99_RS06885 (JAN99_06880) vicX 1407915..1408724 (-) 810 WP_023612763.1 MBL fold metallo-hydrolase Regulator
  JAN99_RS06890 (JAN99_06885) vicK 1408728..1410080 (-) 1353 WP_002985643.1 cell wall metabolism sensor histidine kinase VicK Regulator
  JAN99_RS06895 (JAN99_06890) vicR 1410073..1410783 (-) 711 WP_002985645.1 response regulator YycF Regulator
  JAN99_RS06900 (JAN99_06895) - 1410945..1411979 (-) 1035 WP_161230152.1 DUF3114 domain-containing protein -
  JAN99_RS06905 (JAN99_06900) - 1412035..1413282 (-) 1248 WP_111693060.1 AMP-binding protein -
  JAN99_RS06910 (JAN99_06905) - 1413239..1414387 (-) 1149 WP_111693059.1 acetyl-CoA C-acyltransferase -
  JAN99_RS06915 (JAN99_06910) - 1414782..1414931 (-) 150 WP_002990686.1 hypothetical protein -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51439.91 Da        Isoelectric Point: 5.5556

>NTDB_id=515377 JAN99_RS06890 WP_002985643.1 1408728..1410080(-) (vicK) [Streptococcus pyogenes strain emm9ST603]
MTRDIIGNLSTFELAILILLVFVAFYFIHLAVRDYRNARIIRMMSHKIRYLINGRYTDIIDEKADIELMELSDQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLSKEEALKKNITDLLEGDTSYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLAVEMTNFTAFITSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWIEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKTDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDVD

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=515377 JAN99_RS06890 WP_002985643.1 1408728..1410080(-) (vicK) [Streptococcus pyogenes strain emm9ST603]
ATGACTAGAGATATCATTGGAAACTTATCCACATTTGAATTAGCGATCCTTATCTTACTTGTTTTTGTTGCTTTTTACTT
TATCCATCTTGCGGTGCGTGATTACCGAAATGCACGTATTATTCGGATGATGAGCCATAAAATCCGATACTTGATTAATG
GTCGCTATACTGATATAATCGACGAAAAAGCAGACATTGAGTTAATGGAGCTTTCAGACCAGTTAAATGACCTGTCAGAT
GTTTTTCGCTTGACGCATGAAAATCTTGCCCAAGAAAAAAATCGCTTGGCAAGTATTTTGGCTTATATGTCAGATGGTGT
ACTTGCTACAGACCGGTCTGGTAAAATCATCATGATTAACGAAACAGCTCGCAAGCAATTAAATTTAAGTAAAGAAGAGG
CACTAAAGAAAAACATTACAGATTTGTTAGAAGGTGATACTTCATATACCTACCGTGATTTGGTATCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGTGAGTTTGTCTCATTACGCTTGCGCTTTGCGTTGAATAGGAGAGAGAGTGG
TTTTATTTCGGGCTTGGTTGTGGTGCTCCATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTCT
CTAATGTAAGTCATGAATTAAGGACCCCTTTAACTTCGGTTAAATCCTACTTGGAGGCTCTTGATGAAGGTGCACTTAAA
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACTAATCGGATGATGCGTATGATTTCAGATCTTTTAAA
CCTGTCTCGGATTGATAATCAAGTAACCCAATTAGCAGTAGAGATGACTAATTTTACTGCTTTTATAACTTCTATTTTAA
ACAGATTTGATTTGGTTAAAAATCAGCATACAGGTACAGGAAAAGTCTATGAAATTGTAAGAGATTACCCTATTACCTCT
GTCTGGATTGAAATTGATAATGATAAAATGACACAGGTTATCGAGAATATTTTGAACAATGCCATTAAGTATTCTCCAGA
TGGTGGAAAAATTACAGTCCGTATGAAAACAACAGATACCCAATTAATTATTTCCATTTCAGACCAAGGACTAGGTATTC
CTAAAACAGATTTGCCTCTTATTTTTGATCGGTTCTATCGTGTAGACAAGGCAAGAAGTCGTGCCCAAGGAGGGACCGGT
CTAGGCCTTGCCATTGCTAAAGAAATCATCAAGCAGCACCATGGCTTTATCTGGGCTAAGAGTGACTATGGTAAAGGATC
GACCTTTACTATTGTCTTGCCTTATGAAAAAGATGCAGCCATCTATGAAGAATGGGAGGAAGATGTAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.947

92

0.671

  micB Streptococcus pneumoniae Cp1015

67.529

94.444

0.638