Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   JAN99_RS06885 Genome accession   NZ_CP065927
Coordinates   1407915..1408724 (-) Length   269 a.a.
NCBI ID   WP_023612763.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm9ST603     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1402915..1413724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JAN99_RS06875 (JAN99_06870) smc 1403240..1406779 (-) 3540 WP_136116246.1 chromosome segregation protein SMC -
  JAN99_RS06880 (JAN99_06875) rnc 1406780..1407472 (-) 693 WP_002990670.1 ribonuclease III -
  JAN99_RS06885 (JAN99_06880) vicX 1407915..1408724 (-) 810 WP_023612763.1 MBL fold metallo-hydrolase Regulator
  JAN99_RS06890 (JAN99_06885) vicK 1408728..1410080 (-) 1353 WP_002985643.1 cell wall metabolism sensor histidine kinase VicK Regulator
  JAN99_RS06895 (JAN99_06890) vicR 1410073..1410783 (-) 711 WP_002985645.1 response regulator YycF Regulator
  JAN99_RS06900 (JAN99_06895) - 1410945..1411979 (-) 1035 WP_161230152.1 DUF3114 domain-containing protein -
  JAN99_RS06905 (JAN99_06900) - 1412035..1413282 (-) 1248 WP_111693060.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=515376 JAN99_RS06885 WP_023612763.1 1407915..1408724(-) (vicX) [Streptococcus pyogenes strain emm9ST603]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=515376 JAN99_RS06885 WP_023612763.1 1407915..1408724(-) (vicX) [Streptococcus pyogenes strain emm9ST603]
ATGAATGAGAGTGGTTTTAAATACAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762