Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | I6G39_RS05845 | Genome accession | NZ_CP065712 |
| Coordinates | 1168501..1168767 (+) | Length | 88 a.a. |
| NCBI ID | WP_059107332.1 | Uniprot ID | - |
| Organism | Staphylococcus auricularis strain FDAARGOS_882 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1163501..1173767
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G39_RS05815 (I6G39_05815) | - | 1164116..1164316 (+) | 201 | WP_059107288.1 | YqgQ family protein | - |
| I6G39_RS05820 (I6G39_05820) | - | 1164317..1165303 (+) | 987 | WP_059107289.1 | ROK family glucokinase | - |
| I6G39_RS05825 (I6G39_05825) | - | 1165303..1165614 (+) | 312 | WP_059107290.1 | MTH1187 family thiamine-binding protein | - |
| I6G39_RS05830 (I6G39_05830) | - | 1165630..1166250 (+) | 621 | WP_059107291.1 | MBL fold metallo-hydrolase | - |
| I6G39_RS05835 (I6G39_05835) | comGA | 1166353..1167327 (+) | 975 | Protein_1099 | competence type IV pilus ATPase ComGA | - |
| I6G39_RS05840 (I6G39_05840) | comGB | 1167299..1168372 (+) | 1074 | WP_059107292.1 | competence type IV pilus assembly protein ComGB | - |
| I6G39_RS05845 (I6G39_05845) | comGC | 1168501..1168767 (+) | 267 | WP_059107332.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I6G39_RS05850 (I6G39_05850) | comGD | 1168757..1169194 (+) | 438 | WP_059107293.1 | competence type IV pilus minor pilin ComGD | - |
| I6G39_RS05855 (I6G39_05855) | - | 1169181..1169474 (+) | 294 | WP_059107294.1 | hypothetical protein | - |
| I6G39_RS05860 (I6G39_05860) | - | 1169601..1169891 (+) | 291 | WP_232234391.1 | ComGF family competence protein | - |
| I6G39_RS05865 (I6G39_05865) | - | 1170014..1170571 (+) | 558 | WP_373364595.1 | shikimate kinase | - |
| I6G39_RS05870 (I6G39_05870) | gcvT | 1170752..1171843 (+) | 1092 | WP_059107297.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| I6G39_RS05875 (I6G39_05875) | gcvPA | 1171863..1173215 (+) | 1353 | WP_059107298.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9724.42 Da Isoelectric Point: 7.8607
>NTDB_id=513406 I6G39_RS05845 WP_059107332.1 1168501..1168767(+) (comGC) [Staphylococcus auricularis strain FDAARGOS_882]
MLLVLLIISILLILIIPNIAKQSENIQAKGCDAQLKMVNSQIEAYTLKHDRKPNTIDDLVQDGFIKENQKRCKSGAVIAI
QNGEAHAT
MLLVLLIISILLILIIPNIAKQSENIQAKGCDAQLKMVNSQIEAYTLKHDRKPNTIDDLVQDGFIKENQKRCKSGAVIAI
QNGEAHAT
Nucleotide
Download Length: 267 bp
>NTDB_id=513406 I6G39_RS05845 WP_059107332.1 1168501..1168767(+) (comGC) [Staphylococcus auricularis strain FDAARGOS_882]
ATGTTACTTGTATTATTGATTATTAGTATTTTGCTCATCCTCATAATCCCGAACATCGCGAAACAATCTGAAAACATACA
AGCTAAAGGTTGTGATGCACAACTGAAAATGGTGAACAGTCAAATTGAAGCATATACGCTAAAACATGATAGAAAACCGA
ATACAATTGATGATTTAGTGCAAGATGGTTTTATTAAAGAAAATCAAAAGAGATGTAAATCAGGTGCCGTGATTGCTATT
CAAAACGGGGAAGCGCATGCTACTTAA
ATGTTACTTGTATTATTGATTATTAGTATTTTGCTCATCCTCATAATCCCGAACATCGCGAAACAATCTGAAAACATACA
AGCTAAAGGTTGTGATGCACAACTGAAAATGGTGAACAGTCAAATTGAAGCATATACGCTAAAACATGATAGAAAACCGA
ATACAATTGATGATTTAGTGCAAGATGGTTTTATTAAAGAAAATCAAAAGAGATGTAAATCAGGTGCCGTGATTGCTATT
CAAAACGGGGAAGCGCATGCTACTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
69.014 |
80.682 |
0.557 |
| comGC | Staphylococcus aureus N315 |
69.014 |
80.682 |
0.557 |
| comYC | Streptococcus suis isolate S10 |
47.887 |
80.682 |
0.386 |
| comGC/cglC | Streptococcus mitis SK321 |
44.444 |
81.818 |
0.364 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
44.444 |
81.818 |
0.364 |