Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   I6G42_RS06085 Genome accession   NZ_CP065707
Coordinates   1242578..1243534 (+) Length   318 a.a.
NCBI ID   WP_038805095.1    Uniprot ID   A0A7T2ZVK4
Organism   Streptococcus oralis strain FDAARGOS_885     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1237578..1248534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G42_RS06070 (I6G42_06070) smpB 1239836..1240303 (+) 468 WP_001051742.1 SsrA-binding protein SmpB -
  I6G42_RS06075 (I6G42_06075) tehB 1240318..1241178 (+) 861 WP_000413063.1 SAM-dependent methyltransferase TehB -
  I6G42_RS06080 (I6G42_06080) - 1241356..1242503 (+) 1148 Protein_1183 hypothetical protein -
  I6G42_RS06085 (I6G42_06085) coiA 1242578..1243534 (+) 957 WP_038805095.1 competence protein CoiA Machinery gene
  I6G42_RS06090 (I6G42_06090) pepF 1243553..1245355 (+) 1803 WP_038805096.1 oligoendopeptidase F Regulator
  I6G42_RS06095 (I6G42_06095) - 1245357..1246070 (+) 714 WP_068981916.1 O-methyltransferase -
  I6G42_RS06100 (I6G42_06100) - 1246118..1246741 (+) 624 WP_038805097.1 recombinase family protein -
  I6G42_RS06105 (I6G42_06105) - 1247047..1248198 (+) 1152 WP_050562297.1 LPXTG cell wall anchor domain-containing protein -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 37834.36 Da        Isoelectric Point: 9.4778

>NTDB_id=513308 I6G42_RS06085 WP_038805095.1 1242578..1243534(+) (coiA) [Streptococcus oralis strain FDAARGOS_885]
MFVARDAKGNLVNALEKDVTKQPYTCPVCGGGLRLRQGQSVRTHFAHERLRDCIAIFENESPEHLGNKEALYHWAKKDSQ
VALEYSLPEIQQIADVLVNEKLALEVQCSPLSQKILGDRSQGYRSQGYQVIWLLGEKLWLKERLTQLQRGFLYFSQNMGF
YVWELDLKRKILRLKYLLHQDLRGKLHFQVKEFPYGQGNLLEILRFPYQKQKLPHFAVVQDSSICHYIRQQLYYQTPYWM
KKQEEAYQQGDNLLNRQLDDWYPQVRPIASGDFLQIETDLTSYYRNFQAYYQKNPKNNRQKLYPPAFYHLYFSRNMVK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=513308 I6G42_RS06085 WP_038805095.1 1242578..1243534(+) (coiA) [Streptococcus oralis strain FDAARGOS_885]
ATGTTTGTAGCCAGAGATGCCAAGGGAAATTTGGTGAATGCCCTCGAAAAAGATGTGACCAAGCAGCCTTACACCTGCCC
AGTTTGTGGGGGCGGACTACGCTTACGCCAAGGACAGAGTGTTCGAACGCACTTTGCCCATGAAAGGTTAAGGGATTGTA
TCGCTATTTTCGAGAATGAAAGTCCAGAACACTTAGGCAACAAAGAGGCCCTTTATCACTGGGCCAAGAAGGACAGTCAG
GTCGCCTTAGAATATAGTTTGCCCGAGATTCAGCAGATAGCGGATGTTCTCGTCAATGAGAAACTAGCTCTGGAGGTTCA
GTGTAGTCCCTTGTCTCAAAAGATTTTAGGCGATAGAAGCCAAGGATACCGTAGCCAGGGCTATCAGGTTATCTGGCTAC
TGGGAGAAAAACTCTGGTTAAAAGAGCGATTAACACAACTGCAAAGGGGATTTCTCTATTTTAGTCAAAATATGGGTTTC
TATGTTTGGGAACTGGATCTCAAAAGGAAAATTTTGAGACTCAAATATCTTCTGCATCAGGATCTACGTGGCAAGCTTCA
TTTTCAGGTCAAGGAATTTCCCTATGGCCAAGGAAATCTCTTGGAAATTCTACGATTTCCTTATCAAAAACAAAAACTGC
CTCATTTTGCAGTTGTACAAGATTCATCTATCTGTCACTACATTCGTCAGCAGTTGTACTACCAAACGCCTTACTGGATG
AAGAAGCAGGAGGAGGCCTATCAGCAAGGAGACAATCTATTAAACCGTCAACTGGACGACTGGTATCCCCAGGTCAGACC
GATAGCATCAGGTGATTTTTTGCAGATTGAAACGGATCTGACTAGCTATTATAGAAATTTTCAGGCATACTATCAAAAAA
ATCCGAAAAATAATCGCCAAAAGCTCTATCCACCAGCCTTTTATCACTTATATTTCTCAAGAAATATGGTAAAATAG

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(13-248)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T2ZVK4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus pneumoniae Rx1

70.755

100

0.708
  coiA Streptococcus pneumoniae D39

70.755

100

0.708
  coiA Streptococcus pneumoniae R6

70.755

100

0.708
  coiA Streptococcus pneumoniae TIGR4

70.44

100

0.704
  coiA Streptococcus mitis NCTC 12261

70.44

100

0.704
  coiA Lactococcus lactis subsp. cremoris KW2

42.769

100

0.437