Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I6G43_RS02230 Genome accession   NZ_CP065706
Coordinates   457396..459357 (+) Length   653 a.a.
NCBI ID   WP_197905371.1    Uniprot ID   A0A7T3DW72
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 452396..464357
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS02220 (I6G43_02220) - 453499..455109 (+) 1611 WP_001156778.1 glycoside hydrolase family 13 protein -
  I6G43_RS02225 (I6G43_02225) amiA 455279..457246 (+) 1968 WP_038806417.1 peptide ABC transporter substrate-binding protein Regulator
  I6G43_RS02230 (I6G43_02230) amiA3 457396..459357 (+) 1962 WP_197905371.1 peptide ABC transporter substrate-binding protein Regulator
  I6G43_RS02235 (I6G43_02235) - 459547..460992 (+) 1446 WP_038806415.1 LCP family protein -
  I6G43_RS02240 (I6G43_02240) cps4B 460994..461725 (+) 732 WP_038806414.1 capsular polysaccharide biosynthesis protein Cps4B -
  I6G43_RS02245 (I6G43_02245) cpsC 461734..462426 (+) 693 WP_038806413.1 capsular polysaccharide biosynthesis protein CpsC -
  I6G43_RS02250 (I6G43_02250) - 462436..463119 (+) 684 WP_038806412.1 tyrosine-protein kinase -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 73103.34 Da        Isoelectric Point: 4.7457

>NTDB_id=513206 I6G43_RS02230 WP_197905371.1 457396..459357(+) (amiA3) [Streptococcus oralis strain FDAARGOS_886]
MIKMKKRLIGTGLVLATGILLSACGQSNTDTSTFSSTFSANPTTFNYLLDYYADNTAVITNLVDGLLENDSYGNLTPALA
EDWSVSADGLTYTYKLRKDAKWYTADGEEYASVKAQDFVTGIKYAADNKGQAMDLIQNSIKGLNDYVTGVTNDFTTVGVK
ALDDYTVEYTLTRPEPYWNSKTTNSILFPVNEEFLKSKDKEFGTLTPNSILYNGPYLLKDFTSKSSIEYVKNPNYYDHDK
VTIEKVKLAYFDGSDQEMTIRNFESGAYSLAGVYPNSSSYAKTKEKYQDNIVYSLQDKTSWYFNFNVNRKAYNHTAKTSD
QQKNSTQTAILNKNFRQALNFAIDRTTYSAQSNGQEAASKTLRNTLVPPTFVQVGDKTFGEVTASKLVNYGTEWSGINLA
DAQDGYFNKEKVQAKFAEAKKELEAQGVTFPIHLDVPVDQTNKNAVSGMNSLKQTLETVLGSDNVVIDVQQLSTDDFGNV
AFLAPNPAARDYDLNFDGWVGDYQDPSTYLDPFNAEDGFYLKIFGLDAKEDQELIKSLGLDTYTKLLKEADAENQDVAKR
YEKYAEAQAWMIDNSLVMSVMSNGGTASVTKVTPFTRAYSLVGIKGDGNNYKYMRLQKDPVTKKQFDEAKAKWEEESKKA
IEQSQKEFENHIK

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=513206 I6G43_RS02230 WP_197905371.1 457396..459357(+) (amiA3) [Streptococcus oralis strain FDAARGOS_886]
ATGATCAAAATGAAAAAAAGACTTATCGGAACTGGTCTAGTCCTAGCTACAGGGATTTTACTTTCAGCTTGTGGACAGTC
CAATACAGATACAAGCACCTTCTCATCAACATTTAGTGCGAATCCGACAACTTTTAACTATCTTCTAGATTATTATGCAG
ATAACACTGCTGTTATTACCAATCTCGTAGATGGTTTGCTAGAAAATGATAGCTATGGCAATCTAACGCCAGCTCTAGCT
GAAGATTGGTCTGTTTCAGCAGATGGTTTGACCTATACCTACAAGCTTAGAAAAGATGCCAAGTGGTATACGGCTGATGG
TGAGGAATATGCTTCAGTAAAAGCTCAGGATTTTGTCACGGGGATCAAATATGCTGCGGACAACAAGGGGCAAGCCATGG
ATCTCATTCAAAATTCTATCAAGGGATTGAATGACTATGTGACAGGTGTGACTAATGACTTCACAACAGTTGGTGTTAAA
GCCTTGGATGACTATACGGTTGAATACACTTTGACACGGCCAGAACCTTATTGGAATTCAAAGACAACCAATAGTATCCT
TTTCCCGGTTAATGAAGAGTTTTTGAAATCAAAGGATAAAGAATTTGGGACCTTGACACCAAATAGCATCCTTTACAACG
GACCGTACTTGTTAAAAGATTTCACATCAAAATCTTCAATCGAGTATGTGAAGAATCCAAACTACTATGATCATGACAAG
GTGACCATTGAGAAAGTGAAACTAGCGTATTTTGATGGCTCTGACCAGGAGATGACCATTCGAAACTTTGAAAGTGGTGC
CTACTCACTTGCGGGAGTCTATCCAAATAGCTCGAGCTATGCCAAGACGAAAGAAAAATATCAAGACAACATTGTTTATA
GCTTACAAGACAAGACTTCTTGGTACTTCAACTTTAACGTTAACCGTAAAGCCTATAACCATACTGCAAAAACATCAGAT
CAACAAAAGAACTCAACGCAAACAGCGATTTTAAATAAGAACTTCCGTCAGGCGCTTAACTTTGCTATCGATCGTACGAC
CTACTCTGCCCAATCTAACGGTCAAGAAGCTGCAAGTAAGACCCTTCGTAATACCCTCGTTCCCCCTACTTTTGTGCAGG
TGGGAGATAAGACCTTTGGAGAAGTAACAGCTTCTAAGCTTGTGAACTACGGAACTGAGTGGTCAGGAATCAACTTGGCG
GATGCCCAAGACGGTTACTTCAACAAGGAAAAGGTCCAAGCAAAATTTGCGGAAGCTAAAAAGGAATTGGAAGCCCAAGG
GGTTACCTTCCCGATCCATTTGGACGTCCCAGTTGATCAAACCAATAAAAATGCAGTTTCTGGGATGAATTCGCTTAAAC
AAACCCTTGAAACAGTATTAGGTTCTGATAATGTCGTCATTGATGTTCAACAGCTTTCAACGGATGACTTTGGGAATGTT
GCTTTCCTAGCACCAAATCCAGCAGCTCGTGATTACGATTTGAACTTTGATGGCTGGGTTGGTGATTATCAAGATCCGTC
AACTTATCTGGATCCATTTAATGCCGAAGATGGTTTTTATCTCAAAATTTTCGGTCTAGATGCTAAGGAAGATCAAGAAT
TGATCAAGAGTCTAGGATTAGATACCTATACAAAACTTCTAAAAGAAGCAGATGCTGAGAATCAAGATGTTGCTAAACGT
TATGAAAAATACGCTGAAGCTCAAGCTTGGATGATTGATAATTCTCTAGTCATGTCTGTTATGTCAAATGGTGGTACAGC
CTCTGTAACTAAAGTAACTCCGTTTACACGTGCCTACTCTCTAGTGGGAATCAAAGGTGATGGAAACAACTACAAGTACA
TGAGACTGCAAAAAGATCCTGTTACCAAGAAACAATTTGATGAAGCTAAGGCTAAGTGGGAAGAAGAAAGTAAAAAGGCT
ATCGAACAAAGTCAAAAAGAATTTGAAAATCATATCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3DW72

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

50.381

100

0.507
  amiA3 Streptococcus thermophilus LMG 18311

50.228

100

0.505
  amiA Streptococcus salivarius strain HSISS4

50

100

0.502