Detailed information NTG0513148

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: I6G44_RS07340
• Genome accession: NZ_CP065702
• Coordinates: 1464470..1464916 (-)
• Length: 148 a.a.
• NCBI ID: WP_031296844.1
• Uniprot ID: A0AAC9R3D6
• Organism: Lactococcus lactis strain FDAARGOS_887
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1459470..1469916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G44_RS07305 (I6G44_07305)	-	1459587..1459964 (-)	378	WP_003129983.1	pyridoxamine 5'-phosphate oxidase family protein	-
I6G44_RS07310 (I6G44_07310)	-	1460169..1461035 (+)	867	WP_010906309.1	RluA family pseudouridine synthase	-
I6G44_RS07315 (I6G44_07315)	-	1461074..1461883 (-)	810	WP_010906310.1	metal ABC transporter permease	-
I6G44_RS07320 (I6G44_07320)	-	1461876..1462613 (-)	738	WP_010906311.1	metal ABC transporter ATP-binding protein	-
I6G44_RS07325 (I6G44_07325)	-	1462790..1463632 (-)	843	WP_197932535.1	metal ABC transporter substrate-binding protein	-
I6G44_RS07330 (I6G44_07330)	-	1463629..1464066 (-)	438	WP_010906313.1	zinc-dependent MarR family transcriptional regulator	-
I6G44_RS07335 (I6G44_07335)	comGG	1464147..1464431 (-)	285	WP_010906314.1	competence type IV pilus minor pilin ComGG	Machinery gene
I6G44_RS07340 (I6G44_07340)	comGF	1464470..1464916 (-)	447	WP_031296844.1	competence type IV pilus minor pilin ComGF	Machinery gene
I6G44_RS07345 (I6G44_07345)	comGE	1464879..1465175 (-)	297	WP_010906316.1	competence type IV pilus minor pilin ComGE	Machinery gene
I6G44_RS07350 (I6G44_07350)	comGD	1465147..1465545 (-)	399	WP_232245082.1	competence type IV pilus minor pilin ComGD	Machinery gene
I6G44_RS07355 (I6G44_07355)	comGC	1465538..1465921 (-)	384	WP_010906318.1	competence type IV pilus major pilin ComGC	Machinery gene
I6G44_RS07360 (I6G44_07360)	comGB	1465935..1467008 (-)	1074	WP_010906319.1	competence type IV pilus assembly protein ComGB	Machinery gene
I6G44_RS07365 (I6G44_07365)	comGA	1466902..1467840 (-)	939	WP_010906320.1	competence type IV pilus ATPase ComGA	Machinery gene

Sequence

Protein

• Length: 148 a.a.
• Molecular weight: 17083.85 Da
• Isoelectric Point: 8.6780

>NTDB_id=513148 I6G44_RS07340 WP_031296844.1 1464470..1464916(-) (comGF) [Lactococcus lactis strain FDAARGOS_887]
MERKLCDLNFKVKAFTLLECLVALLAISGSALVISGLTKMLKEQVAISQSDSIKDWQIFCQQMRFELSGTKLDRVEQNFL
YVTKDKKLRFGFMSDDFRKTDDKGQGYQPMLYDIKAAKIQATKNLITIRIDFNQGGERTFIYQFPEDT

Nucleotide

• Length: 447 bp

>NTDB_id=513148 I6G44_RS07340 WP_031296844.1 1464470..1464916(-) (comGF) [Lactococcus lactis strain FDAARGOS_887]
ATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAAAGCATTTACCTTGTTGGAGTGTTTGGTGGCACTTCTTGCAAT
TTCTGGTTCAGCCCTTGTCATCTCAGGTTTAACAAAGATGTTGAAAGAACAAGTGGCGATTAGTCAAAGTGATAGCATAA
AAGATTGGCAAATTTTCTGTCAGCAAATGCGTTTTGAACTCTCAGGAACAAAATTAGATAGGGTAGAACAGAATTTTCTG
TATGTAACTAAAGATAAAAAACTAAGGTTTGGTTTTATGAGTGATGATTTCCGGAAGACTGATGACAAAGGTCAGGGTTA
TCAGCCAATGCTTTATGATATAAAAGCGGCTAAGATTCAAGCTACTAAAAATTTAATAACCATAAGAATTGATTTTAATC
AAGGAGGTGAAAGAACATTTATTTATCAATTTCCAGAAGATACGTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (48-137)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Lactococcus lactis subsp. cremoris KW2	75.54	93.919	0.709
comYF	Streptococcus mutans UA140	47.518	95.27	0.453
comYF	Streptococcus mutans UA159	46.809	95.27	0.446
comGF/cglF	Streptococcus mitis SK321	43.066	92.568	0.399
comGF/cglF	Streptococcus pneumoniae Rx1	40.426	95.27	0.385
comGF/cglF	Streptococcus pneumoniae D39	40.426	95.27	0.385
comGF/cglF	Streptococcus pneumoniae R6	40.426	95.27	0.385
comGF/cglF	Streptococcus pneumoniae TIGR4	40.426	95.27	0.385
comGF/cglF	Streptococcus mitis NCTC 12261	41.606	92.568	0.385