Detailed information NTG0511206

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: STT128_RS06865
• Genome accession: NZ_CP065500
• Coordinates: 1321753..1322679 (-)
• Length: 308 a.a.
• NCBI ID: WP_064355560.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain ST128
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1316753..1327679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STT128_RS06835 (STT128_06915)	-	1316830..1317624 (-)	795	WP_011681412.1	HAD family hydrolase	-
STT128_RS06840 (STT128_06920)	-	1317809..1318186 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
STT128_RS06845 (STT128_06925)	-	1318191..1318889 (+)	699	WP_347230044.1	ABC transporter ATP-binding protein	-
STT128_RS06850 (STT128_06930)	-	1318901..1319686 (+)	786	WP_011681414.1	hypothetical protein	-
STT128_RS06855 (STT128_06935)	amiF	1319736..1320665 (-)	930	WP_347230045.1	ATP-binding cassette domain-containing protein	Regulator
STT128_RS06860 (STT128_06940)	amiE	1320658..1321743 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
STT128_RS06865 (STT128_06945)	amiD	1321753..1322679 (-)	927	WP_064355560.1	oligopeptide ABC transporter permease OppC	Regulator
STT128_RS06870 (STT128_06950)	amiC	1322679..1324172 (-)	1494	WP_064355564.1	ABC transporter permease	Regulator
STT128_RS06875 (STT128_06955)	amiA3	1324233..1326203 (-)	1971	WP_347230046.1	peptide ABC transporter substrate-binding protein	Regulator
STT128_RS06880 (STT128_06960)	-	1326439..1326629 (-)	191	Protein_1301	IS3 family transposase	-
STT128_RS06885	-	1326620..1327023 (-)	404	Protein_1302	ABC transporter ATP-binding protein	-
STT128_RS06890 (STT128_06975)	-	1327018..1327378 (-)	361	Protein_1303	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34650.80 Da
• Isoelectric Point: 9.7054

>NTDB_id=511206 STT128_RS06865 WP_064355560.1 1321753..1322679(-) (amiD) [Streptococcus thermophilus strain ST128]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=511206 STT128_RS06865 WP_064355560.1 1321753..1322679(-) (amiD) [Streptococcus thermophilus strain ST128]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.351	100	0.994
amiD	Streptococcus thermophilus LMD-9	99.351	100	0.994
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964