Detailed information NTG0507537

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: I3J23_RS07185
• Genome accession: NZ_CP065159
• Coordinates: 1381695..1382858 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain GXU-1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1376695..1387858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I3J23_RS07155 (I3J23_07155)	-	1376960..1377379 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
I3J23_RS07160 (I3J23_07160)	comFC	1377453..1378142 (-)	690	WP_197080391.1	phosphoribosyltransferase family protein	Machinery gene
I3J23_RS07165 (I3J23_07165)	-	1378148..1378432 (-)	285	WP_003151389.1	competence protein ComFB	-
I3J23_RS07170 (I3J23_07170)	comFA	1378490..1379875 (-)	1386	WP_046560106.1	DEAD/DEAH box helicase	Machinery gene
I3J23_RS07175 (I3J23_07175)	-	1379983..1380831 (-)	849	WP_044052857.1	DegV family protein	-
I3J23_RS07180 (I3J23_07180)	degU	1380929..1381618 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
I3J23_RS07185 (I3J23_07185)	degS	1381695..1382858 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
I3J23_RS07190 (I3J23_07190)	-	1383080..1383727 (+)	648	WP_003151384.1	YigZ family protein	-
I3J23_RS07195 (I3J23_07195)	-	1383732..1384946 (+)	1215	WP_003151383.1	LCP family protein	-
I3J23_RS07200 (I3J23_07200)	-	1385036..1386112 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
I3J23_RS07205 (I3J23_07205)	-	1386245..1387441 (-)	1197	WP_079004918.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=507537 I3J23_RS07185 WP_003151385.1 1381695..1382858(-) (degS) [Bacillus amyloliquefaciens strain GXU-1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=507537 I3J23_RS07185 WP_003151385.1 1381695..1382858(-) (degS) [Bacillus amyloliquefaciens strain GXU-1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGTTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948