Detailed information NTG0507530

Bioinformatically predicted

Overview

• Name: comQ
• Type: Regulator
• Locus tag: I3J23_RS05220
• Genome accession: NZ_CP065159
• Coordinates: 1000731..1001717 (-)
• Length: 328 a.a.
• NCBI ID: WP_269321599.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain GXU-1
• Function: modification of ComX; production of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 995731..1006717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I3J23_RS05185 (I3J23_05185)	-	995987..996463 (+)	477	WP_003152059.1	Na+/H+ antiporter subunit E	-
I3J23_RS05190 (I3J23_05190)	-	996463..996747 (+)	285	WP_003152057.1	Na(+)/H(+) antiporter subunit F1	-
I3J23_RS05195 (I3J23_05195)	mnhG	996731..997105 (+)	375	WP_046560012.1	monovalent cation/H(+) antiporter subunit G	-
I3J23_RS05200 (I3J23_05200)	-	997145..997528 (-)	384	WP_003152054.1	hotdog fold thioesterase	-
I3J23_RS05205 (I3J23_05205)	comA	997550..998194 (-)	645	WP_003152052.1	response regulator transcription factor	Regulator
I3J23_RS05210 (I3J23_05210)	comP	998275..1000578 (-)	2304	WP_207579565.1	histidine kinase	Regulator
I3J23_RS05215 (I3J23_05215)	comX	1000598..1000777 (-)	180	WP_306383677.1	competence pheromone ComX	-
I3J23_RS05220 (I3J23_05220)	comQ	1000731..1001717 (-)	987	WP_269321599.1	class 1 isoprenoid biosynthesis enzyme	Regulator
I3J23_RS05225 (I3J23_05225)	degQ	1001848..1001988 (-)	141	WP_003152043.1	degradation enzyme regulation protein DegQ	Regulator
I3J23_RS05235 (I3J23_05235)	-	1002454..1002795 (+)	342	WP_046560014.1	hypothetical protein	-
I3J23_RS05240 (I3J23_05240)	-	1002802..1004022 (-)	1221	WP_003152038.1	EAL and HDOD domain-containing protein	-
I3J23_RS05245 (I3J23_05245)	-	1004152..1005618 (-)	1467	WP_014305722.1	nicotinate phosphoribosyltransferase	-
I3J23_RS05250 (I3J23_05250)	-	1005636..1006187 (-)	552	WP_003152033.1	isochorismatase family cysteine hydrolase	-
I3J23_RS05255 (I3J23_05255)	-	1006284..1006682 (-)	399	WP_003152031.1	DUF1694 domain-containing protein	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 37795.36 Da
• Isoelectric Point: 5.6937

>NTDB_id=507530 I3J23_RS05220 WP_269321599.1 1000731..1001717(-) (comQ) [Bacillus amyloliquefaciens strain GXU-1]
MKTIIEQMCLDANQIKNRMKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LRIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide

• Length: 987 bp

>NTDB_id=507530 I3J23_RS05220 WP_269321599.1 1000731..1001717(-) (comQ) [Bacillus amyloliquefaciens strain GXU-1]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAGAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGGAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains

Predicted by InterproScan.

• Polyprenyl synthetase (polyprenyl_synt) (59-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comQ	Bacillus subtilis subsp. subtilis str. 168	61.246	88.11	0.54