Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I2437_RS01460 Genome accession   NZ_CP065061
Coordinates   280292..282268 (+) Length   658 a.a.
NCBI ID   WP_115251311.1    Uniprot ID   A0A380JV14
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ33     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 275292..287268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2437_RS01445 (IEMOCGPF_00286) - 275921..277102 (-) 1182 WP_206157905.1 serine hydrolase -
  I2437_RS01450 (IEMOCGPF_00287) pbp3 277186..278421 (-) 1236 WP_206157906.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  I2437_RS01455 (IEMOCGPF_00288) pbp3 278745..279983 (-) 1239 WP_043030148.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  I2437_RS01460 (IEMOCGPF_00289) amiA3 280292..282268 (+) 1977 WP_115251311.1 peptide ABC transporter substrate-binding protein Regulator
  I2437_RS01465 (IEMOCGPF_00290) amiC 282332..283831 (+) 1500 WP_012680091.1 ABC transporter permease Regulator
  I2437_RS01470 (IEMOCGPF_00291) amiD 283831..284757 (+) 927 WP_012677390.1 oligopeptide ABC transporter permease OppC Regulator
  I2437_RS01475 (IEMOCGPF_00292) amiE 284766..285836 (+) 1071 WP_012516279.1 ABC transporter ATP-binding protein Regulator
  I2437_RS01480 (IEMOCGPF_00293) amiF 285829..286752 (+) 924 WP_012516278.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72919.32 Da        Isoelectric Point: 5.0136

>NTDB_id=506582 I2437_RS01460 WP_115251311.1 280292..282268(+) (amiA3) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
MKKSKWLTTLGVAALSVSILAACGNSSSKSSESKIYSYVYSSDPSTLDYISTSKATTNDITTNAVDGLLENDQYGNLIPS
LAKDWKVSKDGLTYTYTLRDGIKWYTSDGEEYADVTAEDFVAGVKHAADVNSDALYIIQDSIKGLNDYLNGKTKDFSTVG
VKALDKKTVQYTLNQPESFWNSKLTYSVLAPVNADFLKSKGKDFGKATDPSSILYNGPFLITALTSKSSIELVKNENYWD
AKNVHLDGVQLTFYDGQDQESLFRNFDDGAYSAARLFPTTPSYKTVKKKYGDSITYGQQNATLYYAAFNLNRTSYNHTKK
TSDSQKSDTQKAILNKDFRQAMTFAFDRIAYQAQSAGEDAANKALRSTLVPPTFVQIGDKDFGDVVEEHLVTYGSQWENV
NLDDAQDGLYNPEKAKASFEKAKAALQAEGVQFPIHLDYPMDQTATVLLQQARSMKQSIEKTLGTDNVVIDIIELQRDVY
ENISYLAETPAQNDWDISTASGWGPDYVDPSSYLDIFNPTLANSQTKSIGLEPGKDLAIASAAGLDEFTKLVTEAGKITD
DLNARYTLYAKAQAALTDSAIYIPTISLGGTPRVTKIVPFSGAFAWAGTKNDFYYKYVKLQDKPVTVKQYDKALAEWKKE
KKKSNEEYNNSLEKHIEK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=506582 I2437_RS01460 WP_115251311.1 280292..282268(+) (amiA3) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
ATGAAGAAAAGTAAATGGTTGACAACGCTGGGTGTCGCGGCGCTGTCGGTGTCCATCCTGGCAGCCTGTGGAAACAGCTC
AAGTAAAAGCAGTGAATCAAAGATTTATAGCTATGTCTATTCTAGTGATCCAAGTACTTTAGACTATATCAGTACAAGTA
AAGCAACAACAAATGACATAACAACGAATGCTGTTGATGGGCTTTTGGAAAATGACCAATATGGGAATTTAATCCCCTCT
CTTGCTAAGGATTGGAAGGTCTCAAAGGATGGCTTGACCTATACCTACACGCTTCGTGATGGGATCAAATGGTACACATC
TGATGGTGAAGAATATGCAGATGTGACAGCTGAGGATTTTGTGGCTGGAGTAAAGCACGCAGCAGATGTTAACTCTGATG
CCCTATATATCATTCAGGACTCTATTAAAGGCTTAAACGATTACTTGAACGGTAAGACCAAGGACTTTTCAACCGTAGGT
GTCAAAGCGCTTGACAAAAAAACGGTTCAGTACACCCTTAATCAACCAGAAAGCTTCTGGAATTCAAAGCTAACCTATAG
TGTCCTAGCTCCGGTAAATGCTGACTTCCTAAAATCAAAGGGCAAGGATTTTGGTAAGGCAACAGATCCATCATCTATCC
TGTATAATGGTCCATTTCTTATTACAGCTTTGACAAGTAAATCCTCTATCGAGCTTGTCAAAAACGAAAACTATTGGGAC
GCTAAGAATGTTCACCTTGATGGTGTTCAATTGACCTTTTACGATGGACAGGATCAGGAGTCATTGTTTAGAAACTTTGA
TGACGGAGCTTACTCAGCGGCGAGATTATTCCCAACAACACCTTCTTACAAAACCGTTAAGAAAAAATATGGAGATAGCA
TCACTTACGGACAACAAAATGCTACTCTCTACTATGCGGCATTTAACCTAAACCGTACGTCTTACAACCATACTAAGAAG
ACCTCAGATAGCCAAAAATCAGATACCCAAAAGGCTATCTTAAACAAGGATTTCCGTCAGGCTATGACATTTGCCTTTGA
TAGAATTGCTTATCAGGCGCAATCAGCAGGTGAAGATGCAGCTAACAAAGCGCTTCGTAGCACACTTGTACCACCGACAT
TTGTGCAAATTGGCGACAAAGACTTTGGTGATGTTGTTGAGGAGCACTTGGTGACCTATGGTAGCCAGTGGGAAAATGTA
AATCTAGATGATGCACAGGATGGCTTGTACAATCCTGAAAAGGCAAAAGCATCATTTGAAAAAGCAAAAGCAGCCCTACA
AGCTGAGGGTGTACAGTTCCCAATCCATCTTGATTACCCAATGGATCAAACTGCAACGGTGCTCTTACAGCAGGCTCGCT
CTATGAAGCAGTCAATCGAGAAAACATTAGGAACTGACAATGTTGTGATTGATATTATTGAGCTTCAGAGAGATGTTTAT
GAAAATATTAGTTATCTCGCCGAAACTCCTGCTCAAAATGACTGGGATATTTCAACGGCTTCTGGCTGGGGACCTGACTA
TGTCGACCCATCATCATATCTTGATATTTTCAATCCAACGCTTGCAAACTCACAAACAAAATCAATTGGACTTGAGCCAG
GTAAGGATTTGGCCATTGCTAGTGCAGCTGGCTTAGACGAATTTACAAAGCTAGTGACAGAGGCAGGTAAGATTACTGAT
GATCTCAATGCCCGCTATACGCTCTACGCTAAGGCTCAAGCGGCATTGACAGACTCTGCTATTTACATCCCAACTATCTC
ACTTGGTGGAACACCACGTGTAACTAAAATCGTACCGTTTTCAGGTGCCTTTGCTTGGGCTGGTACTAAAAATGACTTTT
ATTACAAATACGTCAAGCTGCAAGATAAGCCTGTAACTGTTAAACAATATGACAAAGCATTGGCCGAGTGGAAAAAAGAA
AAGAAAAAATCTAACGAAGAATATAACAATTCCCTCGAGAAGCATATTGAAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380JV14

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMG 18311

56.364

100

0.565
  amiA3 Streptococcus thermophilus LMD-9

56.061

100

0.562
  amiA Streptococcus salivarius strain HSISS4

55.994

100

0.561