Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   I2433_RS01740 Genome accession   NZ_CP065056
Coordinates   345549..347525 (+) Length   658 a.a.
NCBI ID   WP_138119770.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ14     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 340549..352525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2433_RS01725 (JDBNIEOD_00335) - 341179..342360 (-) 1182 WP_012516285.1 serine hydrolase -
  I2433_RS01730 (JDBNIEOD_00336) pbp3 342444..343679 (-) 1236 WP_206152370.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  I2433_RS01735 (JDBNIEOD_00337) pbp3 344003..345241 (-) 1239 WP_206152371.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  I2433_RS01740 (JDBNIEOD_00338) amiA3 345549..347525 (+) 1977 WP_138119770.1 peptide ABC transporter substrate-binding protein Regulator
  I2433_RS01745 (JDBNIEOD_00339) amiC 347589..349088 (+) 1500 WP_012680091.1 ABC transporter permease Regulator
  I2433_RS01750 (JDBNIEOD_00340) amiD 349088..350014 (+) 927 WP_021321128.1 oligopeptide ABC transporter permease OppC Regulator
  I2433_RS01755 (JDBNIEOD_00341) amiE 350023..351093 (+) 1071 WP_012516279.1 ABC transporter ATP-binding protein Regulator
  I2433_RS01760 (JDBNIEOD_00342) amiF 351086..352009 (+) 924 WP_012516278.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72863.29 Da        Isoelectric Point: 5.2398

>NTDB_id=506349 I2433_RS01740 WP_138119770.1 345549..347525(+) (amiA3) [Streptococcus equi subsp. zooepidemicus strain SEZ14]
MKKSKWLTTLGVAALSVSILAACGNSSSKSSESKIYSYVYSSDPSTLDYISTSKATTNDITTNAVDGLLENDQYGNLIPS
LAKDWKVSKDGLTYTYTLRDGIKWYTSDGEEYADVTAEDFVAGVKHAADVNSDALYIIQDSIKGLNDYLNGKTKDFSTVG
VKALDKKTVQYTLNQPESFWNSKLTYSVLAPVNADFLKSKGKDFGKATDPSSILYNGPFLITALTSKSSIELVKNENYWD
AKNVHLDGVQLTFYDGQDQESLFRNFDDGAYSAARLFPTTPSYKTVKKKYGDSITYGQQNATLYYAAFNLNRTSYNHTKK
TSDSQKSDTQKAILNKDFRQAMTFAFDRIAYQAQSAGEDAANKSLRSTLVPPTFVQIGDKNFGDVVEEHLVTYGSQWENV
NLDDAQDGLYNPEKAKASFEKAKAALQAEGVQFPIHLDYPMDQTATVLLQQARSMKQSIEKTLGTDNVVIDIIELQKDVY
ENISYLAETPAQNDWDISTASGWGPDYVDPSSYLDIFNPTLANSQTKSIGLEPGKDLAIASAAGLDEFTKLVTEAGKITD
DLNARYTLYAKAQAALTDSAIYIPTISLGGTPRVTKVVPFSGAFAWAGTKNDFYYKYVKLQDKPVTAKQYDKALAEWKKE
KKKSNEKYNNSLEKHIEK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=506349 I2433_RS01740 WP_138119770.1 345549..347525(+) (amiA3) [Streptococcus equi subsp. zooepidemicus strain SEZ14]
ATGAAGAAAAGTAAATGGTTGACAACGCTGGGTGTCGCAGCGCTGTCGGTGTCCATCCTGGCAGCCTGTGGAAACAGCTC
AAGTAAAAGCAGTGAATCAAAGATTTATAGCTATGTCTATTCTAGTGATCCAAGTACTTTAGACTATATCAGTACAAGTA
AAGCAACAACAAATGACATAACAACAAATGCTGTTGATGGGCTTTTGGAAAATGACCAATATGGGAATTTAATCCCCTCT
CTTGCTAAGGATTGGAAGGTCTCAAAGGACGGCTTGACCTATACCTACACGCTTCGTGATGGGATTAAGTGGTACACATC
TGATGGAGAAGAGTATGCAGATGTGACAGCTGAGGATTTTGTAGCTGGAGTAAAGCACGCAGCAGATGTTAACTCTGATG
CCCTATATATCATTCAGGACTCTATTAAAGGCTTAAACGATTACTTGAACGGTAAGACCAAGGACTTTTCAACCGTAGGT
GTCAAAGCACTTGACAAAAAAACAGTTCAGTACACCCTTAATCAACCAGAAAGCTTCTGGAATTCAAAGCTAACCTATAG
TGTCCTAGCTCCGGTAAATGCTGACTTCCTAAAATCAAAGGGCAAGGATTTTGGTAAGGCAACAGATCCATCATCTATCC
TGTATAATGGTCCATTTCTTATCACAGCTTTGACAAGCAAATCCTCTATCGAGCTTGTCAAAAACGAAAATTATTGGGAC
GCTAAGAATGTTCACCTTGATGGTGTTCAATTGACCTTTTACGATGGACAGGATCAGGAGTCATTGTTTAGAAACTTTGA
TGACGGAGCTTACTCAGCGGCGAGATTATTCCCAACAACACCTTCTTATAAAACTGTTAAGAAAAAATATGGAGACAGCA
TCACTTACGGACAACAAAATGCTACTCTCTACTATGCGGCGTTTAACCTAAATCGTACGTCTTACAACCACACTAAGAAG
ACCTCAGATAGCCAAAAATCAGATACCCAAAAGGCTATCTTAAACAAGGATTTCCGTCAGGCTATGACATTTGCCTTTGA
TAGAATTGCTTATCAGGCGCAATCAGCAGGTGAAGATGCAGCTAACAAATCGCTTCGTAGCACACTTGTGCCACCGACAT
TTGTGCAAATTGGCGACAAAAACTTTGGTGATGTTGTTGAGGAGCACTTGGTGACCTATGGTAGCCAGTGGGAAAATGTA
AATCTAGATGATGCACAGGATGGCTTGTACAATCCTGAAAAGGCAAAAGCATCATTTGAAAAAGCAAAAGCAGCCCTACA
AGCTGAGGGTGTACAGTTCCCGATCCATCTTGATTACCCAATGGATCAAACTGCAACGGTGCTCTTACAGCAGGCTCGCT
CTATGAAGCAGTCAATTGAGAAAACATTAGGAACTGACAATGTTGTGATTGATATTATTGAGCTTCAGAAAGATGTTTAT
GAAAATATTAGTTATCTCGCCGAAACTCCTGCTCAAAATGACTGGGATATTTCAACGGCTTCTGGCTGGGGACCTGATTA
TGTCGACCCATCGTCATATCTTGATATTTTCAACCCAACGCTTGCGAACTCACAAACAAAATCAATTGGACTTGAGCCAG
GTAAGGATTTGGCTATTGCTAGTGCAGCTGGCTTAGACGAATTTACAAAGCTAGTGACAGAGGCAGGTAAGATTACTGAT
GATCTCAATGCCCGCTATACGCTCTATGCTAAGGCTCAAGCGGCATTGACAGACTCTGCTATTTATATCCCGACTATCTC
ACTTGGTGGAACACCACGTGTAACTAAAGTGGTACCGTTTTCAGGTGCCTTTGCTTGGGCTGGTACTAAAAATGACTTTT
ATTACAAATACGTCAAGCTACAAGATAAGCCTGTAACTGCTAAACAATATGACAAAGCATTGGCCGAGTGGAAAAAAGAA
AAGAAAAAATCTAACGAAAAATATAATAATTCCCTCGAGAAGCATATTGAAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMG 18311

56.364

100

0.565
  amiA3 Streptococcus thermophilus LMD-9

56.212

100

0.564
  amiA Streptococcus salivarius strain HSISS4

55.994

100

0.561