Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MY9_RS15885 Genome accession   NC_017743
Coordinates   3117558..3118202 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus sp. JS     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3112558..3123202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MY9_RS15850 (MY9_3173) - 3113750..3114181 (+) 432 WP_014665185.1 Na(+)/H(+) antiporter subunit B -
  MY9_RS15855 (MY9_3174) - 3114181..3114522 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  MY9_RS15860 (MY9_3175) - 3114515..3115996 (+) 1482 WP_040081971.1 Na+/H+ antiporter subunit D -
  MY9_RS15865 (MY9_3176) - 3116002..3116478 (+) 477 WP_014665187.1 Na+/H+ antiporter subunit E -
  MY9_RS15870 (MY9_3177) - 3116478..3116762 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  MY9_RS15875 (MY9_3178) mnhG 3116746..3117120 (+) 375 WP_014665188.1 monovalent cation/H(+) antiporter subunit G -
  MY9_RS15880 (MY9_3179) - 3117159..3117539 (-) 381 WP_014665189.1 hotdog fold thioesterase -
  MY9_RS15885 (MY9_3180) comA 3117558..3118202 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  MY9_RS15890 (MY9_3181) comP 3118283..3120583 (-) 2301 WP_014665190.1 histidine kinase Regulator
  MY9_RS15895 (MY9_3182) comX 3120595..3120759 (-) 165 WP_014665191.1 competence pheromone ComX -
  MY9_RS15900 (MY9_3183) - 3120772..3121632 (-) 861 WP_014665192.1 polyprenyl synthetase family protein -
  MY9_RS15905 (MY9_3184) degQ 3121817..3121957 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  MY9_RS21655 - 3122179..3122304 (+) 126 WP_128422565.1 hypothetical protein -
  MY9_RS15910 (MY9_3185) - 3122419..3122787 (+) 369 WP_014665193.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=50633 MY9_RS15885 WP_003220716.1 3117558..3118202(-) (comA) [Bacillus sp. JS]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=50633 MY9_RS15885 WP_003220716.1 3117558..3118202(-) (comA) [Bacillus sp. JS]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGTGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTGGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTTGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTGCAAGAAGTTGAAAAAGGATTTACAAACCAAGAAATCGCAGATGCCCTTCACTTGAGCAAGCGGTCCATTGAATA
CAGCCTGACATCGATTTTCAATAAGCTGAATGTCGGTTCCCGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment