Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SCI_RS05970 Genome accession   NC_022238
Coordinates   1207526..1208329 (-) Length   267 a.a.
NCBI ID   WP_006268738.1    Uniprot ID   F9P8V3
Organism   Streptococcus constellatus subsp. pharyngis C1050     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1202526..1213329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCI_RS05960 (SCI_1174) smc 1202808..1206341 (-) 3534 WP_020997875.1 chromosome segregation protein SMC -
  SCI_RS05965 (SCI_1175) rnc 1206332..1207030 (-) 699 WP_003068697.1 ribonuclease III -
  SCI_RS10755 - 1207166..1207431 (-) 266 Protein_1179 YbaN family protein -
  SCI_RS05970 (SCI_1176) vicX 1207526..1208329 (-) 804 WP_006268738.1 MBL fold metallo-hydrolase Regulator
  SCI_RS05975 (SCI_1177) micB 1208331..1209683 (-) 1353 WP_006268651.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SCI_RS05980 (SCI_1178) yycF 1209676..1210377 (-) 702 WP_003035055.1 response regulator YycF -
  SCI_RS05985 (SCI_1179) - 1210678..1211010 (-) 333 WP_006268722.1 hypothetical protein -
  SCI_RS05990 (SCI_1180) - 1211037..1212350 (-) 1314 WP_006268747.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29825.78 Da        Isoelectric Point: 6.0342

>NTDB_id=50632 SCI_RS05970 WP_006268738.1 1207526..1208329(-) (vicX) [Streptococcus constellatus subsp. pharyngis C1050]
MSEKGFKYSILASGSTGNCFYLETPKKRLLIDAGLSGKKITSLLSEIGRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMVNQL
AQADLAVEHDFHICDTSPDTATPLTDI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=50632 SCI_RS05970 WP_006268738.1 1207526..1208329(-) (vicX) [Streptococcus constellatus subsp. pharyngis C1050]
ATGAGCGAGAAAGGATTTAAGTATAGTATTTTAGCATCGGGTTCTACCGGTAACTGTTTTTATTTAGAAACTCCAAAGAA
GAGGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACCAGCTTATTGAGTGAGATTGGCCGCAAGCCAGAGGATT
TGGATGCTATTTTGGTGACGCACGAGCATAAGGATCATATCCACGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATTTATGCCAATCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAAATTGATGTCAGTCAGAAGCATATTTTTGA
AATGGGAAAAACCAAGACATTTGGCGATATTGACATTGAAAGTTTTGGGGTCAGTCATGATGCGGTTGCGCCGCAATTTT
ACCGATTGATGAAGGATGATAAGAGTTTTGTTCTACTGACGGATACTGGCTATGTTAGCGATCGTATGGCAGGGATTATT
GAAAATGCGGACGGGTATTTGATTGAGTCTAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGTCTGAA
GCAACGGATTTTATCTGACCAAGGACATTTGTCGAATGATGACGGGGCAGAAACCATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGTCATCTTAGCAAAGAAAACAATACCAAAGAATTGGCTCATATCACAATGGTCAATCAATTG
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCGCCAGATACGGCAACTCCATTGACTGATAT
TTAG

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P8V3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.648

100

0.816