Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   I2432_RS05155 Genome accession   NZ_CP065054
Coordinates   1080865..1082175 (+) Length   436 a.a.
NCBI ID   WP_111678059.1    Uniprot ID   A0AAX2LI37
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ13     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1075865..1087175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2432_RS05140 (LJFMMFNO_01026) phoU 1076353..1077006 (+) 654 WP_012678018.1 phosphate signaling complex protein PhoU -
  I2432_RS05145 (LJFMMFNO_01027) - 1077240..1079777 (+) 2538 WP_206158612.1 M1 family metallopeptidase -
  I2432_RS05150 (LJFMMFNO_01028) ciaR 1080198..1080872 (+) 675 WP_037578348.1 response regulator transcription factor Regulator
  I2432_RS05155 (LJFMMFNO_01029) ciaH 1080865..1082175 (+) 1311 WP_111678059.1 HAMP domain-containing sensor histidine kinase Regulator
  I2432_RS05160 (LJFMMFNO_01030) - 1082559..1082987 (+) 429 WP_206158613.1 hypothetical protein -
  I2432_RS05165 (LJFMMFNO_01031) - 1083214..1083609 (+) 396 WP_115250909.1 DUF1433 domain-containing protein -
  I2432_RS05170 (LJFMMFNO_01032) - 1083609..1083854 (+) 246 WP_111678062.1 hypothetical protein -
  I2432_RS05175 (LJFMMFNO_01033) - 1083873..1084271 (+) 399 WP_231871354.1 hypothetical protein -
  I2432_RS05180 (LJFMMFNO_01034) - 1084274..1085467 (+) 1194 WP_249093119.1 hypothetical protein -
  I2432_RS05185 (LJFMMFNO_01035) - 1085464..1085856 (+) 393 WP_165627640.1 hypothetical protein -
  I2432_RS05190 (LJFMMFNO_01036) - 1085872..1086156 (+) 285 WP_037579874.1 hypothetical protein -
  I2432_RS05195 (LJFMMFNO_01037) rpsT 1086354..1086602 (-) 249 WP_012678006.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 436 a.a.        Molecular weight: 49660.31 Da        Isoelectric Point: 9.5548

>NTDB_id=506304 I2432_RS05155 WP_111678059.1 1080865..1082175(+) (ciaH) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
MNKLKKELLSDNYTHFFHFFAIFTGIFVVMTIIILQIMRFSVYSTVDSSLISVGQNASNYANRTMARISSFYFDAENNLI
QALPELEASKSLGSSTTNMDIILFSANGTILNSFDAFSNYQSFRLDKSQLNNIVTTQLMNFYGQKEKYHTLTVKVHIKNY
PAVAYMMAVVNVQQLDTANERYEQIIIMVMIVFWLISILASIYLAKWSRKPIMESYAKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILENSEHIASSLDEVRNMRILTTNLLNLARRDDGIKPQLVDVDAAFFDTVFENYQLVAEESGKQFISAN
QINRPLKTDKALLKQLMTILFDNAIKYTDHNGVVEVKVRTTDKHLLISVIDNGPGIKDDDKKKIFDRFYRVDKARTRQKG
GFGLGLALAQQIVTSLKGTITVSDNKPTGAIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=506304 I2432_RS05155 WP_111678059.1 1080865..1082175(+) (ciaH) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
ATGAATAAACTAAAAAAAGAATTATTGTCCGATAATTATACACATTTTTTTCATTTCTTTGCTATTTTTACAGGCATTTT
TGTTGTCATGACTATCATTATTTTGCAAATCATGAGGTTTAGTGTCTATTCCACAGTAGACAGCAGTCTCATTTCGGTCG
GTCAAAATGCCAGCAACTATGCCAATAGGACCATGGCGAGAATATCTTCCTTTTATTTTGATGCAGAAAATAACCTTATT
CAGGCTCTTCCTGAATTGGAAGCGTCAAAATCACTTGGCTCCTCCACCACTAATATGGATATTATTTTATTTAGTGCCAA
TGGGACGATATTGAATTCCTTTGACGCCTTCTCCAATTACCAAAGCTTTCGTTTAGACAAAAGTCAGCTTAATAACATTG
TCACAACACAGCTGATGAATTTTTATGGGCAAAAGGAGAAATACCATACCCTAACCGTTAAAGTCCACATCAAAAACTAT
CCGGCAGTGGCTTATATGATGGCAGTGGTTAATGTTCAGCAACTGGATACTGCCAATGAGCGCTATGAACAGATTATTAT
CATGGTTATGATTGTCTTTTGGTTAATTTCGATTTTGGCCAGTATTTATTTGGCTAAGTGGAGCAGAAAGCCAATTATGG
AGAGCTATGCCAAGCAAAAAATGTTTGTAGAAAATGCCAGTCATGAGCTTAGAACTCCTTTGGCTGTGCTGCAAAATCGT
TTGGAATCACTGTTTAGAAAGCCTAACGAGACCATTTTAGAAAATAGTGAGCATATTGCTTCAAGCCTAGATGAGGTCCG
CAATATGAGAATATTAACCACTAATTTGTTGAATTTAGCTAGACGCGATGATGGGATCAAGCCGCAGCTAGTTGATGTTG
ATGCAGCCTTTTTTGATACTGTTTTTGAAAATTATCAATTAGTTGCAGAAGAGTCAGGTAAGCAGTTTATCTCAGCTAAT
CAGATCAATAGGCCCTTAAAGACAGATAAGGCCTTACTAAAGCAGCTGATGACCATTTTGTTTGATAACGCGATCAAATA
CACTGATCATAACGGTGTGGTTGAGGTCAAGGTTAGAACGACTGATAAGCATTTATTGATTTCTGTTATTGATAATGGTC
CAGGGATTAAGGACGATGATAAGAAAAAGATTTTTGATCGCTTTTACCGAGTAGATAAGGCAAGGACACGCCAAAAAGGA
GGCTTTGGACTCGGATTGGCCTTAGCGCAGCAGATCGTTACCTCATTAAAAGGAACGATTACCGTCAGTGATAATAAGCC
TACCGGCGCCATCTTTGAAGTAAAATTATAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(220-285)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(329-436)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

57.666

100

0.578
  ciaH Streptococcus pneumoniae Rx1

51.147

100

0.511
  ciaH Streptococcus pneumoniae D39

51.147

100

0.511
  ciaH Streptococcus pneumoniae R6

51.147

100

0.511
  ciaH Streptococcus pneumoniae TIGR4

51.147

100

0.511