Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | I2432_RS00785 | Genome accession | NZ_CP065054 |
| Coordinates | 132008..132961 (+) | Length | 317 a.a. |
| NCBI ID | WP_037580627.1 | Uniprot ID | A0A922NTZ6 |
| Organism | Streptococcus equi subsp. zooepidemicus strain SEZ13 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 127008..137961
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I2432_RS00745 (LJFMMFNO_00148) | - | 127478..128125 (+) | 648 | WP_206158896.1 | ATP-binding cassette domain-containing protein | - |
| I2432_RS00750 (LJFMMFNO_00149) | comGA/cglA | 128306..129244 (+) | 939 | WP_206158897.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I2432_RS00755 (LJFMMFNO_00150) | comYB | 129177..130211 (+) | 1035 | WP_249093266.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| I2432_RS00760 (LJFMMFNO_00151) | comGC/cglC | 130212..130535 (+) | 324 | WP_206158899.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I2432_RS00765 (LJFMMFNO_00152) | comGD | 130513..130938 (+) | 426 | WP_012514783.1 | competence type IV pilus minor pilin ComGD | - |
| I2432_RS00770 (LJFMMFNO_00153) | comGE | 130895..131185 (+) | 291 | WP_206158900.1 | competence type IV pilus minor pilin ComGE | - |
| I2432_RS00775 (LJFMMFNO_00154) | comYF | 131172..131606 (+) | 435 | WP_012677237.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| I2432_RS00780 (LJFMMFNO_00155) | comGG | 131584..131946 (+) | 363 | WP_206152302.1 | competence type IV pilus minor pilin ComGG | - |
| I2432_RS00785 (LJFMMFNO_00156) | comYH | 132008..132961 (+) | 954 | WP_037580627.1 | class I SAM-dependent methyltransferase | Machinery gene |
| I2432_RS00790 (LJFMMFNO_00157) | - | 133021..134220 (+) | 1200 | WP_165627047.1 | acetate kinase | - |
| I2432_RS00795 (LJFMMFNO_00158) | - | 134831..135013 (-) | 183 | WP_206158901.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| I2432_RS00800 (LJFMMFNO_00159) | - | 135031..135282 (-) | 252 | WP_206158902.1 | bacteriocin class II family protein | - |
| I2432_RS00805 (LJFMMFNO_00160) | - | 135796..137838 (+) | 2043 | WP_115250224.1 | BglG family transcription antiterminator | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35741.74 Da Isoelectric Point: 4.8471
>NTDB_id=506283 I2432_RS00785 WP_037580627.1 132008..132961(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI
Nucleotide
Download Length: 954 bp
>NTDB_id=506283 I2432_RS00785 WP_037580627.1 132008..132961(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATCTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGTCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCAGCTAGTATTGCTGAAATCATGGGGTCGTCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGTTGTTAAAAGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATCTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGTCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCAGCTAGTATTGCTGAAATCATGGGGTCGTCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGTTGTTAAAAGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
62.658 |
99.685 |
0.625 |
| comYH | Streptococcus mutans UA140 |
62.658 |
99.685 |
0.625 |