Detailed information NTG0506121

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: I1A55_RS16390
• Genome accession: NZ_CP065040
• Coordinates: 3179673..3180848 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain Ba1449
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3174673..3185848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I1A55_RS16360	-	3174849..3175268 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
I1A55_RS16365	comFC	3175325..3176011 (-)	687	WP_026050153.1	amidophosphoribosyltransferase	Machinery gene
I1A55_RS16370	-	3176008..3176301 (-)	294	WP_008348267.1	late competence development ComFB family protein	-
I1A55_RS16375	comFA	3176366..3177745 (-)	1380	WP_026050154.1	DEAD/DEAH box helicase	Machinery gene
I1A55_RS16380	-	3177865..3178707 (-)	843	WP_007499966.1	DegV family protein	-
I1A55_RS16385	degU	3178919..3179608 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
I1A55_RS16390	degS	3179673..3180848 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
I1A55_RS16395	-	3181070..3181738 (+)	669	WP_008348276.1	YigZ family protein	-
I1A55_RS16400	-	3181723..3182820 (+)	1098	WP_007499958.1	LCP family protein	-
I1A55_RS16405	-	3182858..3183925 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
I1A55_RS16410	tuaH	3184060..3185307 (-)	1248	WP_099496874.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=506121 I1A55_RS16390 WP_003213166.1 3179673..3180848(-) (degS) [Bacillus altitudinis strain Ba1449]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=506121 I1A55_RS16390 WP_003213166.1 3179673..3180848(-) (degS) [Bacillus altitudinis strain Ba1449]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTCAGGGAAAGAAGAGACGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATAGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841