Detailed information NTG0505989

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: I6L86_RS02460
• Genome accession: NZ_CP077259
• Coordinates: 557596..558594 (-)
• Length: 332 a.a.
• NCBI ID: WP_004239104.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain FDAARGOS 1456
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 552596..563594

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L86_RS02440 (I6L86_02440)	eeP	553845..555104 (-)	1260	WP_000900673.1	RIP metalloprotease RseP	Regulator
I6L86_RS02445 (I6L86_02445)	-	555126..555929 (-)	804	WP_000189860.1	phosphatidate cytidylyltransferase	-
I6L86_RS02450 (I6L86_02450)	-	555938..556696 (-)	759	WP_000466726.1	isoprenyl transferase	-
I6L86_RS02455 (I6L86_02455)	-	557043..557615 (-)	573	WP_001028387.1	nucleotidyltransferase family protein	-
I6L86_RS02460 (I6L86_02460)	ruvB	557596..558594 (-)	999	WP_004239104.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
I6L86_RS02465 (I6L86_02465)	-	558728..558820 (+)	93	WP_000970293.1	type I toxin-antitoxin system Fst family toxin	-
I6L86_RS02470 (I6L86_02470)	-	559628..560044 (-)	417	WP_000628389.1	GNAT family N-acetyltransferase	-
I6L86_RS02475 (I6L86_02475)	-	560056..560751 (-)	696	WP_001144927.1	GNAT family N-acetyltransferase	-
I6L86_RS02480 (I6L86_02480)	leuS	560946..563447 (-)	2502	WP_000011743.1	leucine--tRNA ligase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37244.67 Da
• Isoelectric Point: 4.5018

>NTDB_id=505989 I6L86_RS02460 WP_004239104.1 557596..558594(-) (ruvB) [Streptococcus mitis strain FDAARGOS 1456]
MSRILDNEIMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLELPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVID
DLITDKALTMLDVDHEGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAK
AYEHLGYEYSEK

Nucleotide

• Length: 999 bp

>NTDB_id=505989 I6L86_RS02460 WP_004239104.1 557596..558594(-) (ruvB) [Streptococcus mitis strain FDAARGOS 1456]
ATGAGTAGAATTTTAGATAATGAGATAATGGGGGACGAGGAGTTAGTAGAACGCACGCTCCGTCCTCAGTACTTACGTGA
ATATATTGGGCAGGACAAGGTCAAGGACCAGCTCCAAATCTTTATCGAAGCTGCCAAAATGCGGGATGAAGCGCTGGATC
ATGTGCTCTTATTTGGCCCTCCAGGCTTGGGAAAAACGACCATGGCTTTTGTTATTGCCAACGAACTAGGTGTCAATCTC
AAGCAGACTTCGGGTCCAGTCATTGAAAAAGCCGGAGATCTGGTAGCGATTTTGAATGACTTAGAGCCTGGGGATGTCCT
TTTTATTGATGAGATTCATCGCTTGCCCATGTCGGTGGAAGAGGTGCTTTATAGTGCCATGGAAGACTTCTACATTGACA
TCATGATTGGGGCTGGTGAAGGCAGTCGCAGTGTTCATTTGGAGTTGCCACCTTTCACTTTGATTGGTGCGACGACTCGG
GCTGGTATGCTCTCAAATCCGTTACGGGCACGTTTTGGGATTACAGGTCATATGGAGTATTATGCCCATGCTGACTTGAC
GGAAATTGTCGAGCGGACGGCAGATATTTTTGAGATGGAAATCACCCATGAGGCAGCATCTGAGTTGGCATTGCGTAGTC
GTGGGACCCCTCGTATTGCCAATCGTCTCCTCAAGCGCGTGCGCGATTTTGCCCAGATAATGGGGAATGGGGTTATCGAT
GATCTTATTACCGATAAGGCTTTGACTATGCTGGATGTTGACCATGAAGGTTTGGACTATGTGGATCAAAAAATCCTTCG
CACCATGATTGAGATGTACGGTGGTGGTCCTGTTGGTCTAGGAACTCTTTCTGTTAACATAGCAGAAGAACGTGAGACAG
TTGAAGATATGTATGAGCCTTACTTGATTCAAAAAGGTTTTATCATGCGGACGCGGTCTGGACGGGTGGCGACTGCTAAG
GCATATGAGCACTTAGGTTATGAATATAGTGAAAAATGA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	99.096	100	0.991
ruvB	Streptococcus pneumoniae R6	99.096	100	0.991
ruvB	Streptococcus pneumoniae D39	99.096	100	0.991
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.429	98.193	0.593
ruvB	Helicobacter pylori 26695	50.774	97.289	0.494
ruvB	Synechocystis sp. PCC 6803	48.193	100	0.482