Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6L84_RS00215 Genome accession   NZ_CP077224
Coordinates   48276..49040 (-) Length   254 a.a.
NCBI ID   WP_045772585.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS 1454     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 43276..54040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L84_RS00195 (I6L84_00195) - 44688..45206 (+) 519 WP_020992856.1 YehR family protein -
  I6L84_RS00200 (I6L84_00200) - 45225..45428 (-) 204 WP_008808039.1 DUF951 domain-containing protein -
  I6L84_RS00205 (I6L84_00205) dnaN 45428..46564 (-) 1137 WP_008808038.1 DNA polymerase III subunit beta -
  I6L84_RS00210 (I6L84_00210) dnaA 46720..48072 (-) 1353 WP_008808037.1 chromosomal replication initiator protein DnaA -
  I6L84_RS00215 (I6L84_00215) spo0J 48276..49040 (-) 765 WP_045772585.1 ParB/RepB/Spo0J family partition protein Regulator
  I6L84_RS00220 (I6L84_00220) htrA 49106..50299 (-) 1194 WP_060553296.1 S1C family serine protease Regulator
  I6L84_RS00225 (I6L84_00225) rlmH 50493..50972 (+) 480 WP_060553297.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6L84_RS00235 (I6L84_00235) comC/comC2 51259..51411 (+) 153 WP_008808033.1 bacteriocin Regulator
  I6L84_RS00240 (I6L84_00240) comD/comD2 51427..52785 (+) 1359 WP_060553298.1 competence system sensor histidine kinase ComD Regulator
  I6L84_RS00245 (I6L84_00245) comE/comE2 52782..53549 (+) 768 WP_008808031.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 29304.04 Da        Isoelectric Point: 9.4945

>NTDB_id=505743 I6L84_RS00215 WP_045772585.1 48276..49040(-) (spo0J) [Streptococcus gordonii strain FDAARGOS 1454]
MENYQYILIKDIHTNPYQPRKDFSIEKLNELANSIKENGLIQPIIVRKSSIIGYELLAGERRFRAAKIAGLTEIPALVKS
LSDDEMMKQAIIENLQREDLNPIEEAESYQHLIYKGLTHDEIAQIMGKSRPYITNLVRLLQLPDFVLKAVKEGHISQAHA
RLLIKLKEKDQKKWLEKIISSDISVRKLEKLLQTSPTKPKSENVQKIFIEEEEENLKKLLGVDVKISLSKKQTGKISISF
SNQEEYERIINSLK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=505743 I6L84_RS00215 WP_045772585.1 48276..49040(-) (spo0J) [Streptococcus gordonii strain FDAARGOS 1454]
ATGGAAAATTATCAATATATTTTAATTAAAGATATTCACACCAATCCCTATCAACCAAGAAAAGATTTTTCAATAGAGAA
ATTAAACGAGTTGGCAAATTCTATTAAAGAAAACGGATTAATCCAGCCTATTATCGTCAGGAAATCATCTATCATTGGAT
ACGAACTTTTAGCTGGGGAAAGAAGATTTAGGGCAGCTAAAATAGCAGGCTTAACTGAAATTCCTGCCTTAGTAAAATCA
CTAAGCGATGATGAAATGATGAAGCAGGCTATTATTGAAAATCTTCAAAGAGAGGATCTCAATCCAATAGAAGAAGCTGA
ATCTTATCAACATCTTATTTATAAGGGATTGACGCATGATGAAATCGCTCAGATTATGGGGAAATCAAGGCCTTATATTA
CAAATCTTGTTCGCTTGCTACAGCTACCTGATTTTGTCTTAAAAGCTGTAAAAGAAGGTCATATTTCTCAGGCTCATGCT
CGATTATTAATAAAACTTAAGGAAAAAGACCAGAAAAAATGGCTTGAAAAAATTATTTCTTCAGATATTTCTGTTAGAAA
ATTAGAGAAATTATTACAGACTTCTCCTACTAAGCCTAAGTCTGAAAATGTCCAAAAAATTTTTATAGAGGAAGAAGAAG
AAAATCTAAAGAAATTATTGGGAGTTGATGTAAAGATTAGTCTCTCTAAGAAACAAACTGGCAAAATCTCAATTTCTTTT
TCTAATCAGGAAGAATATGAAAGAATTATTAACAGTCTTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.331

100

0.543