Detailed information NTG0505078

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: LLDRC3_RS00435
• Genome accession: NZ_CP064835
• Coordinates: 80250..82397 (+)
• Length: 715 a.a.
• NCBI ID: WP_063283540.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain DRC3
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 75250..87397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLDRC3_RS00410 (LLDRC3_0075)	-	76387..76854 (+)	468	WP_010905090.1	universal stress protein	-
LLDRC3_RS00415 (LLDRC3_0076)	-	76983..77180 (+)	198	WP_010905091.1	DUF4649 domain-containing protein	-
LLDRC3_RS00420 (LLDRC3_0077)	-	77211..77831 (+)	621	WP_023163569.1	alpha/beta hydrolase	-
LLDRC3_RS00425 (LLDRC3_0078)	-	77882..79051 (+)	1170	WP_010905093.1	ring-cleaving dioxygenase	-
LLDRC3_RS00430 (LLDRC3_0079)	-	79062..79652 (+)	591	WP_003132255.1	flavin reductase family protein	-
LLDRC3_RS00435 (LLDRC3_0080)	comA	80250..82397 (+)	2148	WP_063283540.1	peptide cleavage/export ABC transporter	Regulator
LLDRC3_RS00440 (LLDRC3_0081)	-	82412..83833 (+)	1422	WP_010905095.1	HlyD family secretion protein	-
LLDRC3_RS00445 (LLDRC3_0082)	-	83927..84052 (+)	126	WP_021214955.1	lactococcin family bacteriocin	-
LLDRC3_RS00450 (LLDRC3_0083)	-	84378..84746 (+)	369	WP_223848592.1	transporter	-
LLDRC3_RS00455 (LLDRC3_0084)	-	84785..85441 (+)	657	WP_063283572.1	CPBP family intramembrane glutamic endopeptidase	-
LLDRC3_RS00460 (LLDRC3_0085)	-	85544..85825 (-)	282	WP_010905098.1	hypothetical protein	-
LLDRC3_RS00465 (LLDRC3_0086)	-	85835..86080 (-)	246	WP_194942581.1	hypothetical protein	-
LLDRC3_RS00470 (LLDRC3_0087)	-	86325..86543 (+)	219	WP_010905100.1	hypothetical protein	-
LLDRC3_RS00475 (LLDRC3_0088)	-	86637..86774 (+)	138	WP_021214958.1	lactococcin family bacteriocin	-

Sequence

Protein

• Length: 715 a.a.
• Molecular weight: 79865.39 Da
• Isoelectric Point: 8.3038

>NTDB_id=505078 LLDRC3_RS00435 WP_063283540.1 80250..82397(+) (comA) [Lactococcus lactis subsp. lactis strain DRC3]
MKFKKKNYTSQVDEMDCGCAALSMILKSYGTEKSLASLRLLAGTTIEGTSALGIKKAGEGLGFVVQVLRADASLFEMKKV
PYPFIAHVIKNQKYPHYYVITGANKNSVFIADPDPTVKMTKLSKEVFLSEWTGISLFLSPTPSYQPTKEKTSSLLSFIPI
ITRQKKVILNIVIASFIVTLINILGSYYLQSMIDSYIPNALMGTLGIISVGLLLTYIIQQVLEFAKAFLLNVLSQRLAID
VILSYIRHIFQLPMSFFSTRRTGEITSRFSDASSILDAIASTILSLFLDLTIVLMTGLILGLQNMQLFLLVLLAIPLYIV
VIIIFTPLFERQNHEVMQTNAILNSSIIEDINGIETIKALASEQERYQKIDYEFASYLKEAFTLQQSEAIQTAIKTTVQL
VLNVLILWFGATLVMHQKITLGQLITFNALLSYFTNPITNIINLQTKLQKARVANERLNEVYLVPSEFEEKKTELSLSHF
NLNMSEISYQYGFGRKVLSEIKLSIKENEQLTIVGISGSGKSTLVKLLVNFFQPTSGTITLGGIDLQQFDKHQLRRLINY
LPQQPYIFTGSIMDNLLLGASEATSQEEIIRAVELAEIRADIEQMQLGYQTELSSDASSLSGGQKQRIALARALLSPAKI
LILDEATSNLDMITEKKILKNLLALDKTIIFIAHRLSVAEMSHRIIVIEQGKVIESGSHSELLAQNGFYAQLYHN

Nucleotide

• Length: 2148 bp

>NTDB_id=505078 LLDRC3_RS00435 WP_063283540.1 80250..82397(+) (comA) [Lactococcus lactis subsp. lactis strain DRC3]
ATGAAATTTAAAAAGAAAAATTATACCTCCCAAGTAGATGAAATGGATTGTGGATGTGCTGCTTTATCAATGATTTTAAA
ATCCTATGGGACAGAAAAATCGCTTGCCTCTCTTCGTTTACTTGCTGGTACAACAATCGAGGGAACTTCCGCTTTAGGAA
TAAAAAAAGCAGGAGAAGGTTTAGGTTTTGTAGTTCAAGTACTAAGAGCTGATGCAAGCCTTTTTGAAATGAAGAAAGTC
CCTTACCCTTTTATTGCTCATGTCATCAAGAACCAAAAGTATCCACACTACTATGTGATAACTGGCGCAAATAAAAATTC
GGTATTCATCGCAGATCCTGACCCAACCGTTAAAATGACAAAACTTTCAAAAGAAGTTTTCTTATCAGAGTGGACAGGCA
TTAGCTTATTTCTTTCACCTACCCCATCCTATCAGCCCACTAAAGAAAAAACTTCTTCATTATTATCTTTTATCCCAATT
ATCACCCGTCAAAAGAAAGTCATTCTCAATATTGTAATTGCCTCATTCATTGTAACGTTGATTAATATTCTAGGGTCTTA
CTACCTCCAGAGCATGATTGATAGTTACATTCCAAATGCCTTAATGGGAACTTTAGGGATTATCTCAGTAGGGCTATTGT
TAACTTATATTATCCAACAAGTCTTAGAGTTTGCTAAGGCTTTCTTACTAAACGTTCTTTCTCAAAGATTAGCCATTGAT
GTCATCCTTTCCTATATTAGACACATTTTCCAACTCCCGATGTCTTTCTTTTCGACTAGAAGAACAGGGGAAATTACCAG
TCGGTTTTCCGATGCCAGTTCTATTTTGGATGCTATTGCCTCAACGATTCTTTCGCTCTTTTTAGATTTAACCATTGTTC
TTATGACAGGACTGATTTTAGGGCTTCAAAATATGCAACTCTTTCTTCTCGTTCTTTTGGCAATCCCACTTTATATTGTT
GTTATTATTATTTTTACTCCGCTTTTTGAAAGACAAAATCATGAAGTTATGCAAACCAATGCCATCTTAAATTCCTCAAT
TATTGAAGACATTAATGGGATTGAAACCATCAAAGCGCTCGCCAGTGAACAAGAGAGATATCAAAAAATTGACTACGAAT
TTGCAAGTTATCTAAAAGAGGCTTTCACTTTACAACAGTCAGAAGCCATTCAGACGGCAATAAAAACGACAGTACAACTT
GTACTAAATGTTCTTATTTTATGGTTTGGTGCAACTTTAGTCATGCATCAAAAAATTACCCTCGGACAACTCATTACTTT
TAATGCCTTGCTTTCTTACTTTACAAATCCAATTACTAATATCATTAACCTTCAAACAAAACTACAAAAGGCAAGGGTAG
CCAATGAACGATTAAATGAGGTCTATCTTGTACCCAGTGAATTTGAAGAAAAGAAAACAGAACTGTCCCTCTCACATTTT
AATTTAAACATGTCTGAGATTTCATATCAATATGGTTTTGGCAGAAAAGTCTTATCTGAGATAAAACTGTCTATTAAAGA
AAATGAACAGTTGACCATTGTTGGTATAAGCGGTTCAGGGAAGAGTACTCTTGTTAAATTATTGGTCAACTTCTTTCAAC
CCACTTCTGGTACCATTACTTTAGGTGGAATTGACCTTCAACAGTTTGATAAACATCAACTTCGACGATTAATCAACTAT
CTTCCCCAACAACCTTATATTTTCACAGGTTCAATTATGGATAATTTACTTTTAGGCGCTAGTGAAGCTACTTCACAAGA
AGAGATTATTAGAGCGGTGGAATTGGCAGAAATCCGTGCAGATATTGAACAAATGCAATTAGGTTATCAAACTGAACTCT
CAAGTGATGCAAGTAGTTTATCGGGAGGACAAAAACAGAGAATTGCGCTCGCTCGTGCCCTCCTTTCTCCTGCCAAAATA
CTCATCTTAGACGAAGCCACCAGTAATCTTGATATGATTACTGAAAAGAAAATATTAAAGAATTTGTTGGCACTAGATAA
GACAATTATTTTCATTGCTCACCGCCTCTCTGTAGCGGAAATGAGCCATCGTATCATTGTCATTGAACAAGGAAAAGTGA
TAGAAAGTGGTTCACATTCAGAACTGCTTGCTCAAAATGGCTTTTACGCACAACTTTACCATAACTAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (169-437)

• ABC transporter (ABC_tran) (498-648)

• Peptidase C39 family (Peptidase_C39) (6-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus gordonii str. Challis substr. CH1	61.064	99.86	0.61
comA	Streptococcus mitis NCTC 12261	60.084	99.86	0.6
comA	Streptococcus mitis SK321	59.944	99.86	0.599
comA	Streptococcus pneumoniae R6	59.664	99.86	0.596
comA	Streptococcus pneumoniae Rx1	59.664	99.86	0.596
comA	Streptococcus pneumoniae D39	59.664	99.86	0.596
comA	Streptococcus pneumoniae TIGR4	59.384	99.86	0.593
comA/nlmT	Streptococcus mutans UA159	58.635	100	0.589