Detailed information NTG0504052

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: IVG45_RS17010
• Genome accession: NZ_CP064653
• Coordinates: 3642886..3643947 (+)
• Length: 353 a.a.
• NCBI ID: WP_196434984.1
• Uniprot ID: -
• Organism: Methylomonas sp. LL1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3637886..3648947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IVG45_RS16995 (IVG45_16960)	-	3638573..3639940 (+)	1368	WP_230874625.1	AmpG family muropeptide MFS transporter	-
IVG45_RS17000 (IVG45_16965)	rpmE	3640035..3640235 (+)	201	WP_196434982.1	50S ribosomal protein L31	-
IVG45_RS17005 (IVG45_16970)	-	3640305..3642491 (-)	2187	WP_230874857.1	penicillin-binding protein 1A	-
IVG45_RS22710	-	3642510..3642692 (+)	183	WP_230874626.1	hypothetical protein	-
IVG45_RS17010 (IVG45_16975)	pilM	3642886..3643947 (+)	1062	WP_196434984.1	pilus assembly protein PilM	Machinery gene
IVG45_RS17015 (IVG45_16980)	-	3643947..3644519 (+)	573	WP_196434985.1	PilN domain-containing protein	-
IVG45_RS17020 (IVG45_16985)	-	3644516..3645169 (+)	654	WP_196434986.1	type 4a pilus biogenesis protein PilO	-
IVG45_RS17025 (IVG45_16990)	-	3645169..3645723 (+)	555	WP_196434987.1	pilus assembly protein PilP	-
IVG45_RS17030 (IVG45_16995)	pilQ	3645738..3648035 (+)	2298	WP_196434988.1	type IV pilus secretin family protein	-
IVG45_RS17035 (IVG45_17000)	-	3648056..3648535 (-)	480	Protein_3258	ATP-binding protein	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 38301.91 Da
• Isoelectric Point: 4.6770

>NTDB_id=504052 IVG45_RS17010 WP_196434984.1 3642886..3643947(+) (pilM) [Methylomonas sp. LL1]
MSWFNRNQSALLGIDISTAAVKLLELSQTGARFKVESYAVAPLPQDAIIDKNITNVELIGNAIKAAVKQSGTRAKRACVA
VAGSSVMTKIISMPASLNDAEMEEQIMVEADQYIPYSLDEVNLDFEVQGVSKNNPEMLDVLLAASRRENIEDRVEALAHA
GLKAAIVDVEAFAMENAFTLLADQLPEKVENKTVAIADIGATMTALNILYEGKTIYTREQGFGGKQLTEEIQRRYGLSYE
EAGLAKRHGGLPDNYIPDVLEPFKRAMLQQIARSLQFFVSSSANRGVDALILAGGCASIPGLDKLVERDLGIPSYIANPF
INMALSNRVKPQSLSNDTPAMMIACGLALRSFD

Nucleotide

• Length: 1062 bp

>NTDB_id=504052 IVG45_RS17010 WP_196434984.1 3642886..3643947(+) (pilM) [Methylomonas sp. LL1]
ATGAGCTGGTTTAACAGGAATCAGTCCGCTTTGCTCGGTATCGATATCAGTACGGCAGCGGTTAAATTATTGGAGTTAAG
TCAAACCGGCGCCCGCTTCAAAGTCGAAAGCTATGCGGTAGCGCCGCTTCCGCAGGATGCGATTATCGACAAAAACATTA
CCAATGTTGAGTTAATCGGTAATGCGATAAAAGCCGCAGTCAAACAATCCGGTACTCGTGCCAAACGCGCCTGCGTGGCT
GTCGCGGGTTCGTCGGTCATGACCAAAATAATCTCCATGCCGGCATCCTTGAATGATGCCGAGATGGAAGAGCAGATCAT
GGTCGAGGCAGATCAATACATTCCGTATTCACTGGATGAAGTAAATCTTGATTTTGAGGTGCAAGGGGTTTCAAAAAACA
ATCCGGAGATGCTGGACGTGTTGTTGGCCGCATCTCGGCGTGAAAATATCGAAGACCGGGTTGAGGCGCTGGCGCATGCC
GGCTTGAAAGCCGCCATCGTCGATGTGGAGGCCTTTGCCATGGAAAATGCTTTTACCTTGCTTGCCGACCAATTGCCTGA
AAAAGTCGAAAATAAAACCGTCGCCATTGCCGACATTGGCGCAACCATGACCGCGTTGAATATTTTGTACGAAGGCAAAA
CCATTTACACGCGTGAACAAGGATTTGGCGGCAAACAGCTTACCGAAGAAATTCAACGCCGCTATGGGCTTTCCTATGAA
GAAGCGGGATTGGCAAAGCGTCACGGTGGGTTGCCCGATAATTATATTCCCGATGTGTTGGAACCTTTCAAAAGGGCCAT
GCTGCAACAAATCGCCCGCTCGCTTCAGTTTTTTGTGTCTTCGAGCGCCAATCGCGGGGTAGATGCCTTGATTTTGGCGG
GAGGCTGTGCCTCTATCCCCGGTTTGGACAAGTTGGTCGAACGTGATCTCGGCATTCCTTCGTATATCGCCAATCCGTTT
ATCAATATGGCGCTATCCAATCGAGTCAAGCCCCAGAGTTTAAGTAACGATACGCCTGCCATGATGATTGCTTGCGGTTT
AGCGTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	50.142	100	0.501
comM	Acinetobacter nosocomialis M2	50.142	100	0.501
comM	Acinetobacter baylyi ADP1	48.442	100	0.484
pilM	Legionella pneumophila strain ERS1305867	42.776	100	0.428