Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   KRG72_RS02705 Genome accession   NZ_CP076703
Coordinates   509744..510415 (-) Length   223 a.a.
NCBI ID   WP_258255779.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 504744..515415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS02680 (KRG72_02680) trpC 504976..505743 (+) 768 WP_258255775.1 indole-3-glycerol phosphate synthase TrpC -
  KRG72_RS02685 (KRG72_02685) - 505730..506311 (+) 582 WP_258255776.1 phosphoribosylanthranilate isomerase -
  KRG72_RS02690 (KRG72_02690) trpB 506308..507510 (+) 1203 WP_074563251.1 tryptophan synthase subunit beta -
  KRG72_RS02695 (KRG72_02695) trpA 507514..508296 (+) 783 WP_133018030.1 tryptophan synthase subunit alpha -
  KRG72_RS02700 (KRG72_02700) - 508332..509672 (-) 1341 WP_258255778.1 Nramp family divalent metal transporter -
  KRG72_RS02705 (KRG72_02705) cclA/cilC 509744..510415 (-) 672 WP_258255779.1 A24 family peptidase Machinery gene
  KRG72_RS02710 (KRG72_02710) - 510554..511078 (+) 525 WP_074559453.1 DNA starvation/stationary phase protection protein -
  KRG72_RS02715 (KRG72_02715) - 511209..511418 (+) 210 WP_006531568.1 YqgQ family protein -
  KRG72_RS02720 (KRG72_02720) - 511411..512379 (+) 969 WP_039697292.1 ROK family glucokinase -
  KRG72_RS02725 (KRG72_02725) - 512390..512770 (+) 381 WP_039697291.1 rhodanese-like domain-containing protein -
  KRG72_RS02730 (KRG72_02730) typA 512956..514800 (+) 1845 WP_074559456.1 translational GTPase TypA -
  KRG72_RS02735 (KRG72_02735) - 514890..515162 (+) 273 WP_039697289.1 DUF3165 family protein -

Sequence

Protein


Download         Length: 223 a.a.        Molecular weight: 25406.72 Da        Isoelectric Point: 7.5096

>NTDB_id=504039 KRG72_RS02705 WP_258255779.1 509744..510415(-) (cclA/cilC) [Streptococcus equinus strain S1]
MDILLFFFLGASLASFIGLVVDRFPKESILFPASHCETCGKKLEVRDLIPVFSQIINRSRCRFCHTKLPIWYGIFEFICG
ILTAVCYQGMLPLSTLFIIFLSLTLSIYDLKYQSFPLLIWLLPSASLLLFLPLNTVSIILLLLGIIAELFDIKIGSGDFF
YLASLSLFLDLESILWIVELGSLIGILYCLFYKNKRIPFVPFLFLGYLLVAFLSALNFFVKYS

Nucleotide


Download         Length: 672 bp        

>NTDB_id=504039 KRG72_RS02705 WP_258255779.1 509744..510415(-) (cclA/cilC) [Streptococcus equinus strain S1]
ATGGACATTTTATTATTCTTTTTTCTCGGAGCATCGCTGGCTTCATTTATCGGATTAGTTGTTGATCGCTTTCCAAAGGA
ATCTATTTTATTTCCAGCTAGTCATTGTGAGACTTGTGGTAAGAAACTTGAGGTTCGTGACTTGATTCCTGTGTTTTCAC
AAATTATCAATCGGTCACGCTGCCGTTTTTGTCACACAAAACTCCCAATTTGGTATGGCATTTTTGAATTCATCTGCGGA
ATATTAACTGCCGTCTGCTATCAAGGAATGCTACCACTCTCGACACTCTTTATCATCTTTTTAAGTCTCACGCTCAGTAT
CTACGATTTAAAATACCAATCATTTCCTCTATTAATCTGGTTACTGCCTAGTGCTTCTTTACTCCTTTTTCTTCCACTTA
ATACGGTAAGTATTATTCTTCTTTTACTTGGGATCATAGCTGAGCTTTTTGACATAAAAATCGGTAGCGGTGATTTTTTC
TACCTAGCCAGTTTGAGTCTTTTTCTTGATTTGGAGAGCATTTTATGGATTGTTGAACTGGGTTCTTTAATAGGAATTTT
GTATTGTCTTTTTTATAAAAATAAACGCATTCCCTTTGTTCCTTTTCTATTTTTAGGCTATCTTTTGGTTGCGTTTTTAA
GCGCACTTAATTTTTTTGTTAAATATAGTTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-87)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis NCTC 12261

44.231

93.274

0.413
  cclA/cilC Streptococcus pneumoniae TIGR4

44.231

93.274

0.413
  cclA/cilC Streptococcus mitis SK321

43.269

93.274

0.404
  cclA/cilC Streptococcus pneumoniae Rx1

43.269

93.274

0.404
  cclA/cilC Streptococcus pneumoniae D39

43.269

93.274

0.404
  cclA/cilC Streptococcus pneumoniae R6

43.269

93.274

0.404