Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | KE3_RS01655 | Genome accession | NC_021900 |
| Coordinates | 309379..310377 (+) | Length | 332 a.a. |
| NCBI ID | WP_020916203.1 | Uniprot ID | A0AB33AK26 |
| Organism | Streptococcus lutetiensis 033 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 304379..315377
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KE3_RS01630 (KE3_0331) | - | 304609..305058 (+) | 450 | WP_020916197.1 | DUF523 domain-containing protein | - |
| KE3_RS01635 (KE3_0332) | purE | 305058..305546 (+) | 489 | WP_020916198.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| KE3_RS01640 (KE3_0333) | purK | 305533..306624 (+) | 1092 | WP_020916199.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| KE3_RS11080 | - | 306627..306722 (+) | 96 | Protein_285 | phosphoribosylaminoimidazole carboxylase | - |
| KE3_RS01645 (KE3_0334) | purB | 306812..308110 (+) | 1299 | WP_020916200.1 | adenylosuccinate lyase | - |
| KE3_RS01650 (KE3_0335) | comR | 308299..309177 (+) | 879 | WP_173636488.1 | helix-turn-helix domain-containing protein | Regulator |
| KE3_RS01655 (KE3_0337) | ruvB | 309379..310377 (+) | 999 | WP_020916203.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| KE3_RS10715 (KE3_0338) | - | 310550..310756 (+) | 207 | WP_020916204.1 | DUF7010 family protein | - |
| KE3_RS11180 (KE3_0339) | - | 310716..311081 (+) | 366 | WP_231853261.1 | DUF7010 family protein | - |
| KE3_RS01665 (KE3_0340) | - | 311320..311751 (+) | 432 | WP_014334179.1 | low molecular weight protein-tyrosine-phosphatase | - |
| KE3_RS01670 (KE3_0341) | - | 311769..312149 (+) | 381 | WP_006531314.1 | membrane protein | - |
| KE3_RS01675 (KE3_0342) | - | 312146..313939 (+) | 1794 | WP_020916207.1 | acyltransferase family protein | - |
Sequence
Protein
Download Length: 332 a.a. Molecular weight: 37381.84 Da Isoelectric Point: 4.6106
>NTDB_id=50009 KE3_RS01655 WP_020916203.1 309379..310377(+) (ruvB) [Streptococcus lutetiensis 033]
MSRILDNDIMGDEEFVERTLRPQYLKEYIGQDKVKNQLKIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAILNDLEPGDVLFIDEIHRMPMAIEEVLYSAMEDFYIDIMIGNGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAVDDLTEIVERTADIFEMEIVHEAAQELARRSRGTPRIANRLLKRVRDYAQIMGDGIIT
KDITDKALTMLDVDHEGLDYIDQKILRTMIEVYNGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFIMRTRTGRVATAK
AYDHLGYSYAEK
MSRILDNDIMGDEEFVERTLRPQYLKEYIGQDKVKNQLKIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAILNDLEPGDVLFIDEIHRMPMAIEEVLYSAMEDFYIDIMIGNGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAVDDLTEIVERTADIFEMEIVHEAAQELARRSRGTPRIANRLLKRVRDYAQIMGDGIIT
KDITDKALTMLDVDHEGLDYIDQKILRTMIEVYNGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFIMRTRTGRVATAK
AYDHLGYSYAEK
Nucleotide
Download Length: 999 bp
>NTDB_id=50009 KE3_RS01655 WP_020916203.1 309379..310377(+) (ruvB) [Streptococcus lutetiensis 033]
ATGAGTAGAATTTTAGATAATGATATCATGGGTGACGAAGAATTTGTGGAACGTACGCTTCGTCCTCAATATTTAAAAGA
ATATATTGGACAGGATAAGGTTAAAAATCAGCTGAAAATTTTTATTGAAGCAGCAAAATTACGTGATGAATCACTTGACC
ATGTGCTATTGTTTGGCCCTCCGGGTCTTGGTAAGACGACAATGGCATTTGTGATTGCTAACGAATTAGGGGTGAATCTC
AAACAAACTTCTGGCCCAGCTATTGAAAAAGCTGGTGATTTGGTTGCTATTTTGAATGATTTGGAACCTGGGGATGTTTT
GTTTATCGATGAAATTCATCGTATGCCGATGGCGATAGAAGAAGTGCTTTATAGCGCTATGGAAGATTTCTATATTGATA
TTATGATTGGTAATGGTGAGACTAGTCGTAGTGTTCATTTGGATTTGCCACCTTTTACGCTAATTGGAGCAACAACTCGA
GCAGGGATGCTTTCGAATCCATTGCGTGCGCGTTTTGGAATTACGGGGCATATGGAATATTATGCGGTTGACGATTTGAC
AGAAATTGTTGAACGCACAGCTGATATTTTTGAAATGGAAATCGTGCATGAAGCTGCACAAGAATTGGCGCGACGTAGCC
GAGGTACACCACGTATTGCCAACCGTTTGTTAAAACGGGTTCGTGACTATGCTCAAATTATGGGTGATGGTATTATTACA
AAAGATATTACAGATAAAGCTTTAACAATGCTGGATGTCGATCATGAAGGGCTTGATTACATTGACCAAAAAATCTTGCG
TACTATGATTGAAGTTTATAATGGTGGTCCAGTTGGTTTGGGAACTCTATCTGTTAATATTGCTGAAGAGCGTGATACGG
TTGAGGATATGTATGAACCTTATTTGATTCAAAAGGGCTTTATTATGCGTACACGTACAGGTCGTGTAGCTACAGCTAAA
GCATATGATCATCTGGGGTATTCTTATGCTGAAAAATAA
ATGAGTAGAATTTTAGATAATGATATCATGGGTGACGAAGAATTTGTGGAACGTACGCTTCGTCCTCAATATTTAAAAGA
ATATATTGGACAGGATAAGGTTAAAAATCAGCTGAAAATTTTTATTGAAGCAGCAAAATTACGTGATGAATCACTTGACC
ATGTGCTATTGTTTGGCCCTCCGGGTCTTGGTAAGACGACAATGGCATTTGTGATTGCTAACGAATTAGGGGTGAATCTC
AAACAAACTTCTGGCCCAGCTATTGAAAAAGCTGGTGATTTGGTTGCTATTTTGAATGATTTGGAACCTGGGGATGTTTT
GTTTATCGATGAAATTCATCGTATGCCGATGGCGATAGAAGAAGTGCTTTATAGCGCTATGGAAGATTTCTATATTGATA
TTATGATTGGTAATGGTGAGACTAGTCGTAGTGTTCATTTGGATTTGCCACCTTTTACGCTAATTGGAGCAACAACTCGA
GCAGGGATGCTTTCGAATCCATTGCGTGCGCGTTTTGGAATTACGGGGCATATGGAATATTATGCGGTTGACGATTTGAC
AGAAATTGTTGAACGCACAGCTGATATTTTTGAAATGGAAATCGTGCATGAAGCTGCACAAGAATTGGCGCGACGTAGCC
GAGGTACACCACGTATTGCCAACCGTTTGTTAAAACGGGTTCGTGACTATGCTCAAATTATGGGTGATGGTATTATTACA
AAAGATATTACAGATAAAGCTTTAACAATGCTGGATGTCGATCATGAAGGGCTTGATTACATTGACCAAAAAATCTTGCG
TACTATGATTGAAGTTTATAATGGTGGTCCAGTTGGTTTGGGAACTCTATCTGTTAATATTGCTGAAGAGCGTGATACGG
TTGAGGATATGTATGAACCTTATTTGATTCAAAAGGGCTTTATTATGCGTACACGTACAGGTCGTGTAGCTACAGCTAAA
GCATATGATCATCTGGGGTATTCTTATGCTGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Streptococcus pneumoniae TIGR4 |
89.759 |
100 |
0.898 |
| ruvB | Streptococcus pneumoniae R6 |
89.759 |
100 |
0.898 |
| ruvB | Streptococcus pneumoniae D39 |
89.759 |
100 |
0.898 |
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
61.92 |
97.289 |
0.602 |
| ruvB | Helicobacter pylori 26695 |
50.155 |
97.289 |
0.488 |
| ruvB | Synechocystis sp. PCC 6803 |
49.524 |
94.88 |
0.47 |