Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   KE3_RS00265 Genome accession   NC_021900
Coordinates   51197..51547 (+) Length   116 a.a.
NCBI ID   WP_020915993.1    Uniprot ID   A0AB33AJH2
Organism   Streptococcus lutetiensis 033     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 46197..56547
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS00230 (KE3_0048) - 47501..47869 (+) 369 WP_020915986.1 DUF1033 family protein -
  KE3_RS00235 (KE3_0049) comGA 47941..48882 (+) 942 WP_020915987.1 competence type IV pilus ATPase ComGA Machinery gene
  KE3_RS00240 (KE3_0050) comGB 48806..49849 (+) 1044 WP_020915988.1 competence type IV pilus assembly protein ComGB Machinery gene
  KE3_RS00245 (KE3_0051) comGC 49849..50142 (+) 294 WP_020915989.1 competence type IV pilus major pilin ComGC Machinery gene
  KE3_RS00250 (KE3_0052) comGD 50126..50557 (+) 432 WP_020915990.1 competence type IV pilus minor pilin ComGD Machinery gene
  KE3_RS00255 (KE3_0053) comGE 50511..50804 (+) 294 WP_020915991.1 competence type IV pilus minor pilin ComGE Machinery gene
  KE3_RS00260 (KE3_0054) comGF 50788..51225 (+) 438 WP_043894883.1 competence type IV pilus minor pilin ComGF Machinery gene
  KE3_RS00265 (KE3_0055) comGG 51197..51547 (+) 351 WP_020915993.1 competence type IV pilus minor pilin ComGG Machinery gene
  KE3_RS00270 (KE3_0056) comGH 51601..52557 (+) 957 WP_020915994.1 class I SAM-dependent methyltransferase Machinery gene
  KE3_RS00275 (KE3_0057) - 52611..53810 (+) 1200 WP_020915995.1 acetate kinase -
  KE3_RS00280 (KE3_0058) - 53970..54167 (+) 198 WP_020915996.1 helix-turn-helix transcriptional regulator -
  KE3_RS00285 (KE3_0059) - 54184..54384 (+) 201 WP_020915997.1 hypothetical protein -
  KE3_RS00290 (KE3_0060) - 54385..54840 (+) 456 WP_020915998.1 hypothetical protein -
  KE3_RS00295 (KE3_0061) - 54855..55490 (+) 636 WP_043894885.1 CPBP family intramembrane glutamic endopeptidase -
  KE3_RS00300 (KE3_0062) proC 55527..56297 (-) 771 WP_020916000.1 pyrroline-5-carboxylate reductase -

Sequence

Protein


Download         Length: 116 a.a.        Molecular weight: 13418.58 Da        Isoelectric Point: 9.1312

>NTDB_id=49997 KE3_RS00265 WP_020915993.1 51197..51547(+) (comGG) [Streptococcus lutetiensis 033]
MFTLLRRQVKAGILLYALLMAAIFALLLQFYLGRVVASERQHQAQIKSAQAYLMAEMSKDLADEESGQYQFDKGTVSYHY
KDKLLVETVTLGSKEEFQYTFYLPKKEKKALEKESH

Nucleotide


Download         Length: 351 bp        

>NTDB_id=49997 KE3_RS00265 WP_020915993.1 51197..51547(+) (comGG) [Streptococcus lutetiensis 033]
TTGTTTACACTTTTAAGACGACAAGTTAAAGCAGGAATTTTATTATATGCCTTACTGATGGCGGCTATCTTTGCACTGCT
TTTGCAATTTTATTTGGGGCGCGTGGTTGCAAGTGAACGTCAACATCAGGCACAGATAAAATCAGCCCAAGCTTACCTGA
TGGCAGAAATGAGTAAAGACTTGGCTGATGAGGAATCAGGACAATACCAATTTGATAAAGGAACAGTAAGTTATCACTAC
AAAGACAAACTCTTAGTAGAGACCGTTACGTTAGGTAGCAAGGAGGAGTTTCAATACACGTTTTACCTTCCTAAGAAAGA
AAAAAAAGCACTTGAAAAAGAAAGTCACTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AB33AJH2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Streptococcus mutans UA140

47.619

90.517

0.431
  comGG Streptococcus mutans UA159

47.619

90.517

0.431
  comGG/cglG Streptococcus mitis NCTC 12261

45.455

85.345

0.388
  comGG/cglG Streptococcus pneumoniae Rx1

43.434

85.345

0.371
  comGG/cglG Streptococcus pneumoniae D39

43.434

85.345

0.371
  comGG/cglG Streptococcus pneumoniae R6

43.434

85.345

0.371
  comGG/cglG Streptococcus pneumoniae TIGR4

43.434

85.345

0.371

Multiple sequence alignment