NTDB

Overview

Name	comQ	Type	Regulator
Locus tag	IRJ28_RS01915	Genome accession	NZ_CP064096
Coordinates	382437..383336 (+)	Length	299 a.a.
NCBI ID	WP_003243039.1	Uniprot ID	G9LQ79
Organism	Bacillus subtilis strain N1142-3at
Function	modification of ComX; production of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 377437..388336

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IRJ28_RS01885	pncA	377902..378453 (+)	552	WP_003243099.1	isochorismatase family cysteine hydrolase	-
IRJ28_RS01890	pncB	378469..379941 (+)	1473	WP_003228788.1	nicotinate phosphoribosyltransferase	-
IRJ28_RS01895	pdeH	380078..381307 (+)	1230	WP_003243525.1	cyclic di-GMP phosphodiesterase	-
IRJ28_RS01900	-	381283..381651 (-)	369	WP_003243784.1	hypothetical protein	-
IRJ28_RS01905	-	381765..381890 (-)	126	WP_003228793.1	hypothetical protein	-
IRJ28_RS01910	degQ	382112..382252 (+)	141	WP_003220708.1	degradation enzyme regulation protein DegQ	Regulator
IRJ28_RS01915	comQ	382437..383336 (+)	900	WP_003243039.1	ComX modifying isoprenyl transferase ComQ	Regulator
IRJ28_RS01920	comX	383324..383491 (+)	168	WP_003242801.1	competence pheromone ComX	Regulator
IRJ28_RS01925	comP	383506..385814 (+)	2309	Protein_381	two-component system sensor histidine kinase ComP	-
IRJ28_RS01930	comA	385895..386539 (+)	645	WP_003220716.1	two-component system response regulator ComA	Regulator
IRJ28_RS01935	yuxO	386558..386938 (+)	381	WP_003228810.1	hotdog fold thioesterase	-
IRJ28_RS01940	mnhG	386977..387351 (-)	375	WP_003244302.1	monovalent cation/H(+) antiporter subunit G	-
IRJ28_RS01945	mrpF	387335..387619 (-)	285	WP_003228814.1	Na(+)/H(+) antiporter subunit F1	-
IRJ28_RS01950	mrpE	387619..388095 (-)	477	WP_003244015.1	Na+/H+ antiporter subunit E	-

Sequence

Protein

Download Length: 299 a.a. Molecular weight: 34218.11 Da Isoelectric Point: 4.8304

                                >NTDB_id=499441 IRJ28_RS01915 WP_003243039.1 382437..383336(+) (comQ) [Bacillus subtilis strain N1142-3at]

MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM

KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV

LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE

KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide

Download Length: 900 bp

                                >NTDB_id=499441 IRJ28_RS01915 WP_003243039.1 382437..383336(+) (comQ) [Bacillus subtilis strain N1142-3at]

ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC

ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG

CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG

AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA

CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT

CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT

TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA

TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC

TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG

AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT

TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG

ATACAAGATGCAAGACCTAA

Domains

Predicted by InterproScan.

Polyprenyl synthetase (polyprenyl_synt)

(44-218)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	G9LQ79

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comQ	Bacillus subtilis subsp. subtilis str. 168	100	100	1

Detailed information NTG0499441