Detailed information NTG0498990

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: IRB21_RS19450
• Genome accession: NZ_CP064089
• Coordinates: 3718006..3719181 (-)
• Length: 391 a.a.
• NCBI ID: WP_008360205.1
• Uniprot ID: A0AAC9NCV1
• Organism: Bacillus altitudinis strain N435-3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3713006..3724181

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IRB21_RS19420	-	3713182..3713601 (-)	420	WP_025208062.1	TIGR03826 family flagellar region protein	-
IRB21_RS19425	comFC	3713658..3714344 (-)	687	WP_172793290.1	ComF family protein	Machinery gene
IRB21_RS19430	-	3714341..3714634 (-)	294	WP_008348267.1	competence protein ComFB	-
IRB21_RS19435	comFA	3714699..3715826 (-)	1128	WP_242731121.1	DEAD/DEAH box helicase	Machinery gene
IRB21_RS19440	-	3716198..3717040 (-)	843	WP_024719242.1	DegV family protein	-
IRB21_RS19445	degU	3717252..3717941 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
IRB21_RS19450	degS	3718006..3719181 (-)	1176	WP_008360205.1	sensor histidine kinase	Regulator
IRB21_RS19455	-	3719403..3720071 (+)	669	WP_035701587.1	YigZ family protein	-
IRB21_RS19460	-	3720056..3721153 (+)	1098	WP_007499958.1	LCP family protein	-
IRB21_RS19465	-	3721191..3722258 (-)	1068	WP_007499956.1	MraY family glycosyltransferase	-
IRB21_RS19470	-	3722393..3723640 (-)	1248	WP_017368143.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=498990 IRB21_RS19450 WP_008360205.1 3718006..3719181(-) (degS) [Bacillus altitudinis strain N435-3]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=498990 IRB21_RS19450 WP_008360205.1 3718006..3719181(-) (degS) [Bacillus altitudinis strain N435-3]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACAGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCATAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.714	98.465	0.844